Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP3Q9BZ76 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTNAP3Q9BZ76 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTNAP3Q9BZ76 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 Z82217.1-201ENST00000625157 8149 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-888P-201ENST00000363010 101 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 SNORA80A-201ENST00000363922 136 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 SNORD74.4-201ENST00000364129 80 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 AL139247.1-201ENST00000422768 325 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 uc_338.14-201ENST00000613162 166 ntBASIC3.82□□□□□ -1.8
CNTNAP3Q9BZ76 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 Y_RNA.298-201ENST00000364960 107 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 RNA5SP151-201ENST00000365632 117 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 SNORD116-22-201ENST00000384430 92 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-1104P-201ENST00000384723 104 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 MIR181A2-201ENST00000384863 110 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 MIR513A2-201ENST00000385249 127 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 AC004941.2-201ENST00000427009 228 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 HLA-N-201ENST00000437516 135 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 RPL12P50-201ENST00000603116 116 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 AC012531.4-201ENST00000616509 177 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 MIR376A2-201ENST00000636782 80 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 AC011266.1-201ENST00000624119 3569 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 AL049781.1-201ENST00000623195 3585 ntBASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNTNAP3Q9BZ76 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-349P-201ENST00000362402 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 SNORA33-201ENST00000363664 130 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 SNORD24-201ENST00000383884 75 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 RNU1-44P-201ENST00000384453 163 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-816P-201ENST00000390914 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-1268P-201ENST00000391214 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-1239P-201ENST00000391310 107 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 AC005326.1-201ENST00000429197 123 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 AC107934.2-201ENST00000518653 310 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 CYP4A43P-201ENST00000568156 121 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 MIR4325-201ENST00000583049 90 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 AC091905.2-201ENST00000623143 306 ntBASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.8□□□□□ -1.8
CNTNAP3Q9BZ76 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 RNU1-15P-201ENST00000353977 144 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 Y_RNA.10-201ENST00000362371 110 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 RNU1-72P-201ENST00000362976 153 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 SNORD115-35-201ENST00000365122 82 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 MIR548A2-201ENST00000384956 97 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-938P-201ENST00000411285 103 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 RPS4XP11-201ENST00000446897 772 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 AC080013.2-201ENST00000460866 323 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 AL133162.1-201ENST00000463228 453 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-795P-201ENST00000516323 103 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-1270P-201ENST00000517128 108 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 HSPE1P18-201ENST00000517602 280 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 SUMO2P16-201ENST00000519475 264 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 AC006111.3-201ENST00000622137 383 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 FAM35CP-201ENST00000554755 2470 ntBASIC3.79□□□□□ -1.8
CNTNAP3Q9BZ76 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-170P-201ENST00000362832 104 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 RNA5SP307-201ENST00000362863 116 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 Y_RNA.426-201ENST00000384068 113 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 MIR3074-201ENST00000384885 81 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 RNA5SP38-201ENST00000410750 119 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 BTF3P4-201ENST00000418852 495 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 RNU7-57P-201ENST00000459540 60 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 RNU6-221P-201ENST00000459541 99 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 AC112771.1-201ENST00000463581 102 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 AC008155.2-201ENST00000464337 397 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 RPL36AP48-201ENST00000485521 314 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 AC079598.5-201ENST00000547460 117 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 MIR3163-201ENST00000581592 73 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 MIR5197-201ENST00000583721 112 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
CNTNAP3Q9BZ76 MIR4727-201ENST00000622232 55 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms