Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ZNF885P-201ENST00000420174 1098 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 AC004386.2-201ENST00000441858 148 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 AC114755.3-201ENST00000481111 251 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 AC092574.1-201ENST00000609771 420 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 AC010999.1-201ENST00000611856 324 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 AP002782.1-201ENST00000623107 614 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 MIR198-201ENST00000637333 62 ntBASIC-0.82□□□□□ -2.54
SCAPERQ9BY12 AC005592.1-201ENST00000566527 1640 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 RNU4-84P-201ENST00000364200 139 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 RNU6-336P-201ENST00000364891 107 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 MIR760-201ENST00000390220 80 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 AC109479.2-201ENST00000517842 174 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 AC087894.1-201ENST00000538359 518 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 AC026470.2-201ENST00000561492 181 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 AL391099.1-201ENST00000624635 187 ntBASIC-0.83□□□□□ -2.54
SCAPERQ9BY12 RNU4-32P-201ENST00000363404 141 ntBASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 MIR1185-2-201ENST00000408687 86 ntBASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 SNORA74.3-201ENST00000517108 154 ntBASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 AL008636.1-201ENST00000625038 1018 ntBASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 MIR499B-201ENST00000636498 73 ntBASIC-0.84□□□□□ -2.54
SCAPERQ9BY12 RNY3-201ENST00000365484 102 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 RNU6-652P-201ENST00000365488 107 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 SNORA36A-201ENST00000384221 132 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 RNA5SP482-201ENST00000391269 118 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 MTND4P32-201ENST00000437189 1237 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 AC007327.1-201ENST00000447461 264 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 AC013244.3-201ENST00000605614 388 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 AC144521.1-201ENST00000607148 956 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 AC068792.1-201ENST00000621354 417 ntBASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.85□□□□□ -2.55
SCAPERQ9BY12 MIR1284-201ENST00000408337 120 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 RNA5SP163-201ENST00000410304 99 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 RNU6-607P-201ENST00000411283 108 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 SNAP23P1-201ENST00000433229 246 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 AL158053.1-201ENST00000441503 453 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 AC009237.7-201ENST00000447357 229 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 AC087499.4-201ENST00000448505 178 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 AC079354.2-201ENST00000453523 154 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 MTND3P25-201ENST00000509243 135 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 MIR2115-201ENST00000516657 100 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 RNU2-56P-201ENST00000516826 190 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 AC012409.4-201ENST00000612923 249 ntBASIC-0.86□□□□□ -2.55
SCAPERQ9BY12 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 MIR587-201ENST00000384845 96 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 AL049545.1-201ENST00000401856 572 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 RPS29P13-201ENST00000402041 169 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 MTND3P20-201ENST00000407663 186 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 MTND1P4-201ENST00000435196 415 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 RPS29P27-201ENST00000463711 170 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 MTCO3P27-201ENST00000514397 196 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 RNU6-123P-201ENST00000516163 102 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 AC103996.1-201ENST00000555468 102 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 AC090897.1-201ENST00000580909 226 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 AC104260.1-201ENST00000616660 539 ntBASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
SCAPERQ9BY12 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 RNU6-428P-201ENST00000362942 107 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 RNU6-236P-201ENST00000363886 106 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 RNU6-25P-201ENST00000383873 107 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 RNU6-15P-201ENST00000384534 107 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 RNU6-29P-201ENST00000384637 107 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 USP9YP11-201ENST00000427537 717 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 MTND1P32-201ENST00000433043 938 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 OR4H6P-202ENST00000603819 340 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 AL139286.2-201ENST00000606838 396 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 MIR8084-201ENST00000614105 89 ntBASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.88□□□□□ -2.55
SCAPERQ9BY12 SNORA72.1-201ENST00000363485 129 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 RNU6-580P-201ENST00000365159 107 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 RNA5SP117-201ENST00000365294 118 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 RNU6-480P-201ENST00000384332 107 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 MIR562-201ENST00000384894 95 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 AL136310.1-201ENST00000404926 654 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 PCNPP5-201ENST00000452246 481 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.89□□□□□ -2.55
SCAPERQ9BY12 U8.21-201ENST00000459536 136 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms