Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 AC091042.1-201ENST00000579213 173 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 MIR6719-201ENST00000622428 87 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.37-201ENST00000362606 108 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 RNU6-409P-201ENST00000384114 104 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.454-201ENST00000384224 113 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 MIR1179-201ENST00000408703 91 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 RNU6-733P-201ENST00000410759 104 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 RPL23AP27-201ENST00000415161 451 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 AL139247.1-201ENST00000422768 325 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 AC006445.1-201ENST00000491925 405 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 RNU2-35P-201ENST00000516446 142 ntBASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.12□□□□□ -1.91
SSBP4Q9BWG4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 MFSD8-236ENST00000641509 4050 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 RNA5SP507-201ENST00000363603 121 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 RNU1-96P-201ENST00000364163 162 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.351-201ENST00000365436 96 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.360-201ENST00000365512 102 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 MIR577-201ENST00000385196 96 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 MIR298-201ENST00000401212 88 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 SNORA11F-201ENST00000408237 128 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 FTH1P12-201ENST00000432137 551 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 HMGN2P16-201ENST00000456802 261 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 RNU2-11P-201ENST00000459191 187 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 RNU7-99P-201ENST00000516271 62 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 RNU7-25P-201ENST00000516544 62 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 SNORA18.7-201ENST00000516910 131 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 RNU6-586P-201ENST00000517265 104 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 MIR4443-201ENST00000585052 53 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SSBP4Q9BWG4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 SNORD115-13-201ENST00000363358 82 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 SNORD115-16-201ENST00000363887 82 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 RNU1-32P-201ENST00000363937 159 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 SNORD115-1-201ENST00000364961 82 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 RNU6-442P-201ENST00000383968 104 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.426-201ENST00000384068 113 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.440-201ENST00000384120 114 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 BTF3P4-201ENST00000418852 495 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 AP001486.1-201ENST00000463339 476 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 AC139453.2-201ENST00000487255 133 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 PHBP14-201ENST00000512887 367 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 RNU6-965P-201ENST00000516721 96 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 SNORD36C-201ENST00000516733 66 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 AL358944.1-201ENST00000528537 144 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 MIR3618-201ENST00000580330 88 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 RN7SL690P-201ENST00000582087 240 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 AC006441.5-201ENST00000612680 209 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 U2.20-201ENST00000613956 192 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 MIR203B-201ENST00000636080 86 ntBASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SSBP4Q9BWG4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 AP003122.5-201ENST00000527668 3766 ntBASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 RNU6-661P-201ENST00000362409 107 ntBASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 RNU6-363P-201ENST00000362895 105 ntBASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.190-201ENST00000363964 101 ntBASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 SNORD14E-201ENST00000364009 85 ntBASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 SNORD113.2-201ENST00000364166 89 ntBASIC3.09□□□□□ -1.91
SSBP4Q9BWG4 RNU6-776P-201ENST00000364403 104 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms