Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.73□□□□□ -1.97
NDC1Q9BTX1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.73□□□□□ -1.97
NDC1Q9BTX1 MIR3144-201ENST00000579460 79 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 MIR4672-201ENST00000583126 81 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 AL078604.3-201ENST00000615580 211 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NDC1Q9BTX1 AC134026.1-201ENST00000623249 2239 ntBASIC2.73□□□□□ -1.97
NDC1Q9BTX1 RNA5SP240-201ENST00000365355 128 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 SNORA40.19-201ENST00000390846 128 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 RN7SKP123-201ENST00000410732 291 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 RNA5SP344-201ENST00000411081 104 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 RNU6-1135P-201ENST00000411083 103 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NDC1Q9BTX1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.72□□□□□ -1.97
NDC1Q9BTX1 AC105272.1-201ENST00000438604 198 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 HMGN2P9-201ENST00000476875 229 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 MTND5P41-201ENST00000517498 206 ntBASIC2.72□□□□□ -1.97
NDC1Q9BTX1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.72□□□□□ -1.97
NDC1Q9BTX1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NDC1Q9BTX1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NDC1Q9BTX1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
NDC1Q9BTX1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
NDC1Q9BTX1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
NDC1Q9BTX1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.7-201ENST00000362352 102 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 RNU6-1048P-201ENST00000364054 107 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 MIR1283-1-201ENST00000408494 87 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 MIR1185-2-201ENST00000408687 86 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 RNU2-2P-201ENST00000410396 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 RNU6-710P-201ENST00000410424 105 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 AC074290.1-201ENST00000448883 135 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 AC114982.1-201ENST00000469402 321 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 RNU6-346P-201ENST00000516288 111 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 MIR4753-201ENST00000585119 83 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 RNU2-4P-201ENST00000606190 192 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.15-201ENST00000611544 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.16-201ENST00000613119 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.12-201ENST00000613778 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.9-201ENST00000615427 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.11-201ENST00000616345 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.2-201ENST00000616535 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.3-201ENST00000617785 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.19-201ENST00000618602 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 RNU2-1-201ENST00000618664 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.6-201ENST00000619225 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.5-201ENST00000619465 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 U2.10-201ENST00000620268 191 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 AC068700.1-201ENST00000565862 3754 ntBASIC2.71□□□□□ -1.98
NDC1Q9BTX1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NDC1Q9BTX1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NDC1Q9BTX1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.71□□□□□ -1.98
NDC1Q9BTX1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.238-201ENST00000364441 102 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.361-201ENST00000365515 120 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.368-201ENST00000365547 113 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 RNU4-17P-201ENST00000365598 141 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.398-201ENST00000383952 99 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 RNU6-546P-201ENST00000383991 107 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 SNORA72.4-201ENST00000384174 132 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 RNU6-855P-201ENST00000410395 104 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 RNU2-63P-201ENST00000410792 194 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 AL139281.1-201ENST00000422120 335 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 AC006483.1-201ENST00000487308 313 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 RNU7-200P-201ENST00000516105 62 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 AC100767.1-201ENST00000528178 123 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 MIR3616-201ENST00000584070 92 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 AC013791.1-201ENST00000616619 62 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 AC092435.3-201ENST00000565538 3654 ntBASIC2.7□□□□□ -1.98
NDC1Q9BTX1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
NDC1Q9BTX1 MIR449A-201ENST00000362113 91 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.287-201ENST00000364853 94 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.310-201ENST00000365063 113 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.341-201ENST00000365341 102 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 RNY1P5-201ENST00000383890 115 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 Y_RNA.441-201ENST00000384123 112 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 MIR512-1-201ENST00000384913 84 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 MIR95-201ENST00000385072 81 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 MTCO2P33-201ENST00000402100 465 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 RNU5E-9P-201ENST00000411164 104 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 RNU2-32P-201ENST00000411193 191 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 AL513477.1-202ENST00000417061 214 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
NDC1Q9BTX1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.69□□□□□ -1.98
NDC1Q9BTX1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.69□□□□□ -1.98
NDC1Q9BTX1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.69□□□□□ -1.98
NDC1Q9BTX1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.69□□□□□ -1.98
NDC1Q9BTX1 RNU6-965P-201ENST00000516721 96 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 AC022616.8-201ENST00000533569 253 ntBASIC2.69□□□□□ -1.98
NDC1Q9BTX1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.69□□□□□ -1.98
NDC1Q9BTX1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms