Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
UPK3BQ9BT76 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
UPK3BQ9BT76 RNU4-9P-201ENST00000364951 139 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 RNU6-38P-201ENST00000384085 107 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 MIR605-201ENST00000385078 83 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 U8.16-201ENST00000391279 133 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 MTCO2P19-201ENST00000427513 598 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 CALM2P4-201ENST00000430810 426 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 FABP5P4-201ENST00000437203 171 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.45□□□□□ -2.34
UPK3BQ9BT76 SNORD65B-201ENST00000459126 73 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC117454.1-201ENST00000491120 168 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC091885.1-201ENST00000506658 268 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 RNU7-12P-201ENST00000516030 62 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 RNU6-1332P-201ENST00000516666 104 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 RNU7-28P-201ENST00000516759 62 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AP002001.1-203ENST00000534002 267 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AL118558.2-201ENST00000556294 238 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.45□□□□□ -2.34
UPK3BQ9BT76 PRELID3BP2-201ENST00000605362 201 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC017083.3-201ENST00000609955 700 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC104465.1-201ENST00000611365 139 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 AC073534.2-201ENST00000620377 381 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 MIR6079-201ENST00000635807 62 ntBASIC0.45□□□□□ -2.34
UPK3BQ9BT76 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
UPK3BQ9BT76 RNU6-727P-201ENST00000363592 107 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 RNU6-424P-201ENST00000384367 105 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 RNU6-541P-201ENST00000384709 110 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 MIR562-201ENST00000384894 95 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 EIF4E2P1-201ENST00000393781 255 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 RN7SKP142-201ENST00000411236 328 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AL353193.1-201ENST00000421444 268 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC093850.1-201ENST00000454121 251 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 MTND3P7-201ENST00000474435 343 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC010469.2-201ENST00000496412 480 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.44□□□□□ -2.34
UPK3BQ9BT76 SNORA40.12-201ENST00000516329 111 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 RNU2-56P-201ENST00000516826 190 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC027419.1-201ENST00000522976 328 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AK6P2-201ENST00000549020 471 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC026371.1-201ENST00000551867 419 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.44□□□□□ -2.34
UPK3BQ9BT76 RPL21P9-201ENST00000556149 474 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC073648.5-201ENST00000603502 305 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AL133215.3-201ENST00000609801 448 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 MIR6515-201ENST00000619843 57 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 AC006435.5-201ENST00000624486 112 ntBASIC0.44□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.1-201ENST00000352915 104 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 SNORD50.1-201ENST00000362987 71 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.100-201ENST00000363141 102 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RNU6-137P-201ENST00000363680 108 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RNU5F-3P-201ENST00000363767 117 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 SNORD115-32-201ENST00000364079 82 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RNU6-280P-201ENST00000364145 104 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RNY1-201ENST00000364228 113 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.296-201ENST00000364930 108 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.319-201ENST00000365138 92 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 Y_RNA.415-201ENST00000384012 112 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RNU6-348P-201ENST00000384386 107 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 SNORD116-13-201ENST00000384408 92 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RNU6-790P-201ENST00000384479 105 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 MIR153-2-201ENST00000385225 87 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.43□□□□□ -2.34
UPK3BQ9BT76 MTCO2P7-201ENST00000446518 666 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 MRPS10P1-201ENST00000448483 130 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RPS3AP17-201ENST00000472594 777 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AC010598.1-201ENST00000510378 103 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.43□□□□□ -2.34
UPK3BQ9BT76 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AC023157.2-201ENST00000540596 141 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AC004812.1-201ENST00000540773 146 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AL353765.1-201ENST00000605514 183 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AC087752.4-201ENST00000605911 462 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 AC023934.1-201ENST00000574529 2389 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 MTND4P12-201ENST00000498999 1377 ntBASIC0.43□□□□□ -2.34
UPK3BQ9BT76 RNU6-873P-201ENST00000363833 107 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 RNU6-793P-201ENST00000384233 104 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 MIR489-201ENST00000384923 84 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 SNORA75.2-201ENST00000391138 150 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 SNORA75.3-201ENST00000391231 150 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.42□□□□□ -2.34
UPK3BQ9BT76 AC104332.1-201ENST00000440471 797 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 USP9YP29-201ENST00000445112 563 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 RNU6-1208P-201ENST00000459588 107 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 AL049830.1-201ENST00000468034 425 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 COX6CP6-201ENST00000490840 228 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 DEFB108E-201ENST00000524692 240 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.42□□□□□ -2.34
UPK3BQ9BT76 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.42□□□□□ -2.34
UPK3BQ9BT76 AC092807.2-201ENST00000609367 243 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 AL158063.1-201ENST00000615349 536 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 MIR6513-201ENST00000621188 64 ntBASIC0.42□□□□□ -2.34
UPK3BQ9BT76 Z69908.1-201ENST00000622603 247 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms