Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 RNA5SP475-201ENST00000410568 110 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 RNA5SP504-201ENST00000410676 117 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 AC010531.2-201ENST00000465012 153 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-1012P-201ENST00000516606 109 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 AC022616.4-201ENST00000522985 181 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 AP003072.1-201ENST00000531740 145 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 AL353621.2-201ENST00000605340 133 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 AL121655.1-201ENST00000605811 308 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.772-201ENST00000606692 102 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 AC022202.1-201ENST00000613515 211 ntBASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLSTN3Q9BQT9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 MIR410-201ENST00000362222 80 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-1266P-201ENST00000362794 105 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.158-201ENST00000363651 101 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.326-201ENST00000365176 113 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-418P-201ENST00000384035 107 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 Y_RNA.485-201ENST00000384395 102 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 MIR548B-201ENST00000385247 97 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 SNORA26.9-201ENST00000391322 122 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-625P-201ENST00000459412 107 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-221P-201ENST00000459541 99 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-856P-201ENST00000516959 98 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 AC040926.1-201ENST00000530195 238 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 AC010205.1-201ENST00000616668 449 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLSTN3Q9BQT9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 RNU6-101P-201ENST00000410323 104 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 U8.20-201ENST00000459445 131 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 SNORA31.25-201ENST00000517242 134 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 AC007742.2-201ENST00000618226 398 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 AC099654.10-201ENST00000640395 161 ntBASIC2.16□□□□□ -2.06
CLSTN3Q9BQT9 AL159152.1-201ENST00000635019 2587 ntBASIC2.15□□□□□ -2.06
CLSTN3Q9BQT9 AC091812.1-201ENST00000432235 1948 ntBASIC2.15□□□□□ -2.06
CLSTN3Q9BQT9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CLSTN3Q9BQT9 RNA5SP493-201ENST00000364115 91 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.380-201ENST00000365663 111 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-639P-201ENST00000384074 107 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.551-201ENST00000384661 102 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 AL590004.1-201ENST00000405321 300 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-57P-201ENST00000411348 103 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 ELOCP21-201ENST00000412558 336 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 CYCSP49-201ENST00000420810 319 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 AL353689.1-201ENST00000438895 199 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-408P-201ENST00000515910 100 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 SUMO2P18-201ENST00000518873 252 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 MIR4659A-201ENST00000580269 81 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 AC016925.2-201ENST00000605108 242 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 MIR6845-201ENST00000613182 61 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 AC240442.1-201ENST00000616055 283 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 U1.36-201ENST00000620684 176 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 U6.92-201ENST00000636464 89 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 MIR3674-201ENST00000636576 68 ntBASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLSTN3Q9BQT9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 RNU11-3P-201ENST00000391111 133 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 SNORD23.1-201ENST00000408212 104 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AC016717.1-201ENST00000448918 286 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 SUMO1P2-201ENST00000452524 304 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AC005786.1-201ENST00000588553 154 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AP000942.3-201ENST00000603702 160 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AC124312.5-201ENST00000604451 268 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.812-201ENST00000610788 101 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.784-201ENST00000613803 101 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 AC040896.1-201ENST00000613819 479 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.787-201ENST00000616522 101 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.780-201ENST00000617336 101 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.801-201ENST00000619005 101 ntBASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLSTN3Q9BQT9 MIR340-201ENST00000362125 95 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 Y_RNA.230-201ENST00000364348 109 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 SNORD114-6-201ENST00000364393 72 ntBASIC2.13□□□□□ -2.07
CLSTN3Q9BQT9 SNORA33.2-201ENST00000365413 134 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms