Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SCARNA11.3-201ENST00000517276 130 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USB1Q9BQ65 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.85□□□□□ -1.79
USB1Q9BQ65 MIR4305-201ENST00000583252 102 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 AC012531.5-201ENST00000611375 151 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 MIR6891-201ENST00000618788 93 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
USB1Q9BQ65 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
USB1Q9BQ65 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USB1Q9BQ65 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USB1Q9BQ65 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
USB1Q9BQ65 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.84□□□□□ -1.79
USB1Q9BQ65 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
USB1Q9BQ65 RNA5SP322-201ENST00000363617 119 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 RNA5SP151-201ENST00000365632 117 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 RNU6-442P-201ENST00000383968 104 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 SNORA70C-201ENST00000384538 135 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 RPS26P8-201ENST00000393490 348 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 AC091167.1-201ENST00000492017 396 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.84□□□□□ -1.79
USB1Q9BQ65 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 SNORD36C-201ENST00000516733 66 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 RNA5SP73-201ENST00000516744 108 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 IFITM8P-201ENST00000522529 394 ntBASIC3.84□□□□□ -1.79
USB1Q9BQ65 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
USB1Q9BQ65 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.84□□□□□ -1.79
USB1Q9BQ65 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USB1Q9BQ65 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USB1Q9BQ65 Y_RNA.17-201ENST00000362433 111 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 SNORD14E-201ENST00000364009 85 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 MIR218-1-201ENST00000384999 110 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.83□□□□□ -1.8
USB1Q9BQ65 AC092017.2-201ENST00000427600 362 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 HMGN2P7-201ENST00000456186 273 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.83□□□□□ -1.8
USB1Q9BQ65 RNU7-6P-201ENST00000516845 62 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.83□□□□□ -1.8
USB1Q9BQ65 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 AC114781.5-201ENST00000615297 108 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.83□□□□□ -1.8
USB1Q9BQ65 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USB1Q9BQ65 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USB1Q9BQ65 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USB1Q9BQ65 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USB1Q9BQ65 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USB1Q9BQ65 SNORA1B-201ENST00000362535 133 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 RNU1-63P-201ENST00000383902 164 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 Y_RNA.440-201ENST00000384120 114 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 Y_RNA.547-201ENST00000384654 119 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 AL445646.1-201ENST00000431784 216 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 HLA-N-201ENST00000437516 135 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 RNU1-142P-201ENST00000516682 145 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 AP002004.2-201ENST00000531656 154 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
USB1Q9BQ65 MIR3138-201ENST00000585238 82 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 MIR5739-201ENST00000619803 80 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 MIR8059-201ENST00000620427 81 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
USB1Q9BQ65 AC007546.2-201ENST00000623996 360 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
USB1Q9BQ65 AL353746.1-201ENST00000566293 6881 ntBASIC3.82□□□□□ -1.8
USB1Q9BQ65 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USB1Q9BQ65 AC093908.1-201ENST00000623125 8092 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 GABRG2-229ENST00000641017 3628 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
USB1Q9BQ65 MIR331-201ENST00000362302 94 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 RNU6-228P-201ENST00000362700 106 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 SNORD68-201ENST00000363214 84 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 Y_RNA.351-201ENST00000365436 96 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 RNU6-1124P-201ENST00000384169 107 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 RNU1-44P-201ENST00000384453 163 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 RNU1-89P-201ENST00000384592 164 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.81□□□□□ -1.8
USB1Q9BQ65 MICF-203ENST00000432679 129 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 RPL23AP67-201ENST00000465341 474 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 RNU6-1041P-201ENST00000516254 102 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 MIR3683-201ENST00000580847 82 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 MIR3939-201ENST00000582614 106 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 MIR6758-201ENST00000620653 63 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 FAM35CP-201ENST00000554755 2470 ntBASIC3.81□□□□□ -1.8
USB1Q9BQ65 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USB1Q9BQ65 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
USB1Q9BQ65 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.81□□□□□ -1.8
USB1Q9BQ65 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.81□□□□□ -1.8
USB1Q9BQ65 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USB1Q9BQ65 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USB1Q9BQ65 RNU6-268P-201ENST00000364174 107 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 Y_RNA.601-201ENST00000410500 113 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 RNA5SP225-201ENST00000410874 135 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 RNU7-80P-201ENST00000459562 61 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 CKS1BP2-201ENST00000497342 240 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 RNU2-35P-201ENST00000516446 142 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 SNORA18.7-201ENST00000516910 131 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 SCARNA3-201ENST00000517097 143 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 MIR4778-201ENST00000577635 80 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.8□□□□□ -1.8
USB1Q9BQ65 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.8□□□□□ -1.8
USB1Q9BQ65 U7.8-201ENST00000619968 63 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms