Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 Y_RNA.804-201ENST00000615262 101 ntBASIC1.68□□□□□ -2.14
CPNE1Q99829 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
CPNE1Q99829 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CPNE1Q99829 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 AL356292.1-201ENST00000283110 373 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 Y_RNA.67-201ENST00000362870 100 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 Y_RNA.187-201ENST00000363918 113 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 Y_RNA.498-201ENST00000384460 102 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 MIR583-201ENST00000384846 75 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 RNA5SP323-201ENST00000391094 133 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.67□□□□□ -2.14
CPNE1Q99829 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.67□□□□□ -2.14
CPNE1Q99829 RPL36AP21-201ENST00000490372 323 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 RPS29P21-201ENST00000496272 170 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 RPL23AP63-201ENST00000498752 471 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 MTND3P22-201ENST00000510932 243 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 AL137100.2-201ENST00000555786 315 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 MIR3684-201ENST00000579779 74 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 AL359075.3-201ENST00000613288 217 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 AC112487.2-201ENST00000637950 304 ntBASIC1.67□□□□□ -2.14
CPNE1Q99829 SNORA33-201ENST00000363664 130 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 Y_RNA.314-201ENST00000365114 102 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 SNORA40.18-201ENST00000391200 128 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 RNA5SP467-201ENST00000391274 118 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 SNORD12B-201ENST00000410433 91 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 Y_RNA.605-201ENST00000410577 105 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.66□□□□□ -2.14
CPNE1Q99829 MRPS18CP6-201ENST00000423587 223 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 HSPE1P9-201ENST00000440046 311 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.66□□□□□ -2.14
CPNE1Q99829 AC025465.3-201ENST00000510570 311 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 RPL23AP94-201ENST00000512518 302 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 SNORA40.9-201ENST00000515895 93 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 RNU1-142P-201ENST00000516682 145 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 RNA5SP437-201ENST00000517249 129 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 AC093027.1-201ENST00000546698 429 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 AC006435.5-201ENST00000624486 112 ntBASIC1.66□□□□□ -2.14
CPNE1Q99829 MIR410-201ENST00000362222 80 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 Y_RNA.146-201ENST00000363549 102 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 MIR30A-201ENST00000385092 71 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 FTH1P12-201ENST00000432137 551 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 SNORD65B-201ENST00000459126 73 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 RNU6-625P-201ENST00000459412 107 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 RNU6-699P-201ENST00000517081 110 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.65□□□□□ -2.15
CPNE1Q99829 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 LARP7P1-201ENST00000605576 316 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 MIR8074-201ENST00000615081 81 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 AL008636.1-201ENST00000625038 1018 ntBASIC1.65□□□□□ -2.15
CPNE1Q99829 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CPNE1Q99829 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
CPNE1Q99829 SNORD114-1-201ENST00000362705 72 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 RNU6-414P-201ENST00000363705 104 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CPNE1Q99829 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CPNE1Q99829 SNORA11.2-201ENST00000408318 127 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.64□□□□□ -2.15
CPNE1Q99829 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 RNU7-169P-201ENST00000459456 61 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 AC010598.1-201ENST00000510378 103 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 RNU6-911P-201ENST00000516523 104 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.64□□□□□ -2.15
CPNE1Q99829 AL442163.3-201ENST00000554110 156 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 U6.73-201ENST00000619194 103 ntBASIC1.64□□□□□ -2.15
CPNE1Q99829 RNU4-73P-201ENST00000363164 141 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 RNU4-42P-201ENST00000364738 142 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 Y_RNA.428-201ENST00000384078 102 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 RNY3P4-201ENST00000384428 101 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 MIR628-201ENST00000385229 95 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 RNA5SP475-201ENST00000410568 110 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 RAB28P5-201ENST00000427490 651 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.63□□□□□ -2.15
CPNE1Q99829 HMGN2P23-201ENST00000456759 269 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 AL163195.1-201ENST00000496941 348 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CPNE1Q99829 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.63□□□□□ -2.15
CPNE1Q99829 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.63□□□□□ -2.15
CPNE1Q99829 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.63□□□□□ -2.15
CPNE1Q99829 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 U2.1-201ENST00000618978 145 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 MIR3674-201ENST00000636576 68 ntBASIC1.63□□□□□ -2.15
CPNE1Q99829 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CPNE1Q99829 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CPNE1Q99829 Y_RNA.58-201ENST00000362807 102 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 Y_RNA.154-201ENST00000363624 102 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 RNY3P1-201ENST00000365085 102 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 RNY3-201ENST00000365484 102 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 RNU6-1310P-201ENST00000384153 107 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 SNORA70B-201ENST00000384210 135 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 Y_RNA.463-201ENST00000384271 102 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 RNU6-1186P-201ENST00000410429 97 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
CPNE1Q99829 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms