Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
TIMP4Q99727 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
TIMP4Q99727 UBE2DNL-203ENST00000474922 222 ntBASIC2.54□□□□□ -2
TIMP4Q99727 AC007536.1-201ENST00000533382 349 ntBASIC2.54□□□□□ -2
TIMP4Q99727 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.54□□□□□ -2
TIMP4Q99727 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
TIMP4Q99727 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TIMP4Q99727 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.54□□□□□ -2
TIMP4Q99727 AC010329.5-201ENST00000623497 2174 ntBASIC2.53□□□□□ -2
TIMP4Q99727 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TIMP4Q99727 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TIMP4Q99727 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.53□□□□□ -2
TIMP4Q99727 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
TIMP4Q99727 Y_RNA.7-201ENST00000362352 102 ntBASIC2.53□□□□□ -2
TIMP4Q99727 U3.8-201ENST00000363675 217 ntBASIC2.53□□□□□ -2
TIMP4Q99727 Y_RNA.182-201ENST00000363880 111 ntBASIC2.53□□□□□ -2
TIMP4Q99727 Y_RNA.238-201ENST00000364441 102 ntBASIC2.53□□□□□ -2
TIMP4Q99727 Y_RNA.243-201ENST00000364481 109 ntBASIC2.53□□□□□ -2
TIMP4Q99727 Y_RNA.293-201ENST00000364908 93 ntBASIC2.53□□□□□ -2
TIMP4Q99727 RNU6-855P-201ENST00000410395 104 ntBASIC2.53□□□□□ -2
TIMP4Q99727 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
TIMP4Q99727 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.53□□□□□ -2
TIMP4Q99727 RPS20P10-201ENST00000451209 253 ntBASIC2.53□□□□□ -2
TIMP4Q99727 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.53□□□□□ -2
TIMP4Q99727 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.53□□□□□ -2
TIMP4Q99727 SUMO2P18-201ENST00000518873 252 ntBASIC2.53□□□□□ -2
TIMP4Q99727 AC136628.3-201ENST00000521868 290 ntBASIC2.53□□□□□ -2
TIMP4Q99727 AC079600.2-201ENST00000550076 130 ntBASIC2.53□□□□□ -2
TIMP4Q99727 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.53□□□□□ -2
TIMP4Q99727 RPL12P50-201ENST00000603116 116 ntBASIC2.53□□□□□ -2
TIMP4Q99727 AC002064.3-201ENST00000623448 346 ntBASIC2.53□□□□□ -2
TIMP4Q99727 U6.115-201ENST00000636045 103 ntBASIC2.53□□□□□ -2
TIMP4Q99727 AC132825.6-201ENST00000638861 357 ntBASIC2.53□□□□□ -2
TIMP4Q99727 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TIMP4Q99727 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TIMP4Q99727 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TIMP4Q99727 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TIMP4Q99727 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
TIMP4Q99727 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TIMP4Q99727 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TIMP4Q99727 SNORD32B-201ENST00000364460 84 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 FO393413.1-201ENST00000402892 195 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.52□□□□□ -2.01
TIMP4Q99727 RNU5E-9P-201ENST00000411164 104 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 RNA5SP492-201ENST00000411330 114 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
TIMP4Q99727 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.52□□□□□ -2.01
TIMP4Q99727 TMSB4XP3-201ENST00000445144 114 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 RNU7-14P-201ENST00000459331 62 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 RNA5SP112-201ENST00000515937 99 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.52□□□□□ -2.01
TIMP4Q99727 MIR4319-201ENST00000577285 85 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 AC004832.4-201ENST00000608952 331 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.52□□□□□ -2.01
TIMP4Q99727 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TIMP4Q99727 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
TIMP4Q99727 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.51□□□□□ -2.01
TIMP4Q99727 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TIMP4Q99727 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TIMP4Q99727 AL161431.1-201ENST00000618966 4205 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.51□□□□□ -2.01
TIMP4Q99727 Y_RNA.287-201ENST00000364853 94 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 Y_RNA.341-201ENST00000365341 102 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 RNA5SP240-201ENST00000365355 128 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 RNU6-1130P-201ENST00000365434 107 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 RNU4-17P-201ENST00000365598 141 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 SNORD116-18-201ENST00000383961 92 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 MIR29B2-201ENST00000385055 81 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 SNORA26.7-201ENST00000391288 122 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 RNU6-710P-201ENST00000410424 105 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 RNA5SP184-201ENST00000411071 108 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 AC063976.3-201ENST00000426849 329 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 RPL39P40-201ENST00000445481 146 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.51□□□□□ -2.01
TIMP4Q99727 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
TIMP4Q99727 AC021269.2-201ENST00000532318 330 ntBASIC2.51□□□□□ -2.01
TIMP4Q99727 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TIMP4Q99727 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TIMP4Q99727 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.51□□□□□ -2.01
TIMP4Q99727 AC062016.1-201ENST00000355719 319 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 RNU6-944P-201ENST00000364023 107 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 Y_RNA.272-201ENST00000364696 102 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 RNY1P5-201ENST00000383890 115 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 Y_RNA.412-201ENST00000384001 104 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 SNORD14D-201ENST00000384390 87 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 MIR218-1-201ENST00000384999 110 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 MIR586-201ENST00000385035 97 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 MIR613-201ENST00000385248 95 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 AC108938.1-201ENST00000451204 136 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.5□□□□□ -2.01
TIMP4Q99727 MIR4513-201ENST00000581077 86 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 MIR3605-201ENST00000583214 100 ntBASIC2.5□□□□□ -2.01
TIMP4Q99727 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
TIMP4Q99727 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.5□□□□□ -2.01
TIMP4Q99727 AC013791.1-201ENST00000616619 62 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms