Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AF228730.4-201ENST00000421457 183 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 USP9YP30-201ENST00000430729 455 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
CDX2Q99626 MTND1P17-201ENST00000448961 204 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 SNRPGP7-201ENST00000469016 106 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 FO393415.2-201ENST00000480085 343 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 RPL7P42-201ENST00000481005 679 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.19□□□□□ -2.22
CDX2Q99626 MTND3P22-201ENST00000510932 243 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 RNA5SP384-201ENST00000516615 116 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 RNU6-567P-201ENST00000516746 107 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 RNU6-1098P-201ENST00000516772 96 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.19□□□□□ -2.22
CDX2Q99626 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC036111.3-201ENST00000526389 112 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC109446.1-201ENST00000566172 220 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.19□□□□□ -2.22
CDX2Q99626 MIR4790-201ENST00000577799 79 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 PRR13P7-201ENST00000605538 430 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC093913.1-201ENST00000614178 329 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC130454.1-201ENST00000622948 401 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AL008636.1-201ENST00000625038 1018 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC068205.3-201ENST00000636385 468 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 MIR1302-1-201ENST00000637932 143 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 AC099654.10-201ENST00000640395 161 ntBASIC1.19□□□□□ -2.22
CDX2Q99626 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.19□□□□□ -2.22
CDX2Q99626 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
CDX2Q99626 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDX2Q99626 Y_RNA.31-201ENST00000362574 102 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 Y_RNA.166-201ENST00000363730 102 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 RNU6-1317P-201ENST00000364582 104 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 RNU4-56P-201ENST00000364700 142 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 Y_RNA.315-201ENST00000365117 102 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 RNU6-308P-201ENST00000390957 107 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 Y_RNA.646-201ENST00000410980 101 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 RNU6-325P-201ENST00000411132 105 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 AC099677.2-201ENST00000436385 175 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.18□□□□□ -2.22
CDX2Q99626 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.18□□□□□ -2.22
CDX2Q99626 AC010531.2-201ENST00000465012 153 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 AC087477.1-201ENST00000465747 340 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 FGF7P4-201ENST00000509595 295 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 AC026782.1-201ENST00000512952 449 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CDX2Q99626 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.18□□□□□ -2.22
CDX2Q99626 RPL17P51-201ENST00000605218 238 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.18□□□□□ -2.22
CDX2Q99626 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.18□□□□□ -2.22
CDX2Q99626 MIR6128-201ENST00000615528 109 ntBASIC1.18□□□□□ -2.22
CDX2Q99626 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDX2Q99626 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.17□□□□□ -2.22
CDX2Q99626 RNU6-562P-201ENST00000362731 107 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 RNU5B-2P-201ENST00000363036 113 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 Y_RNA.504-201ENST00000384481 104 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 RNU6-310P-201ENST00000384655 107 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 Y_RNA.579-201ENST00000390939 94 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 RNU6-510P-201ENST00000391239 108 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 RN7SKP200-201ENST00000410564 320 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 RPS26P42-201ENST00000413485 326 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AC243428.1-201ENST00000421099 264 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AC012306.1-201ENST00000423267 114 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AC139712.2-201ENST00000424302 339 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.17□□□□□ -2.22
CDX2Q99626 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.17□□□□□ -2.22
CDX2Q99626 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.17□□□□□ -2.22
CDX2Q99626 AC093019.1-201ENST00000443135 252 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.17□□□□□ -2.22
CDX2Q99626 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.17□□□□□ -2.22
CDX2Q99626 HSPE1P24-201ENST00000450782 238 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AC005908.1-201ENST00000468701 347 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 Y_RNA.661-201ENST00000516003 99 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.17□□□□□ -2.22
CDX2Q99626 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.17□□□□□ -2.22
CDX2Q99626 MIR3973-201ENST00000579824 107 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.17□□□□□ -2.22
CDX2Q99626 AL356055.1-201ENST00000602528 446 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 AC124303.1-201ENST00000605703 360 ntBASIC1.17□□□□□ -2.22
CDX2Q99626 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.17□□□□□ -2.22
CDX2Q99626 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CDX2Q99626 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDX2Q99626 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 RNY3P11-201ENST00000364153 102 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 Y_RNA.259-201ENST00000364619 101 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 RNU6-474P-201ENST00000384243 107 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 MIR549A-201ENST00000385268 96 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 AL117342.1-201ENST00000404861 406 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 Y_RNA.594-201ENST00000410373 140 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 RNU6-370P-201ENST00000411008 104 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.16□□□□□ -2.22
CDX2Q99626 MTND3P9-201ENST00000429526 346 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 AC245047.4-201ENST00000433189 144 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.16□□□□□ -2.22
CDX2Q99626 AL359672.1-201ENST00000442302 409 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 AC097473.1-201ENST00000508142 408 ntBASIC1.16□□□□□ -2.22
CDX2Q99626 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.16□□□□□ -2.22
CDX2Q99626 RNU6-559P-201ENST00000516151 98 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms