Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.12□□□□□ -1.75
PHOX2BQ99453 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.12□□□□□ -1.75
PHOX2BQ99453 SNORA48.11-201ENST00000517015 89 ntBASIC4.12□□□□□ -1.75
PHOX2BQ99453 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.12□□□□□ -1.75
PHOX2BQ99453 AL356280.1-201ENST00000603614 379 ntBASIC4.12□□□□□ -1.75
PHOX2BQ99453 AP001318.4-201ENST00000616637 121 ntBASIC4.12□□□□□ -1.75
PHOX2BQ99453 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PHOX2BQ99453 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PHOX2BQ99453 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PHOX2BQ99453 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHOX2BQ99453 Y_RNA.323-201ENST00000365157 109 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 Y_RNA.348-201ENST00000365403 103 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 RNU6-1014P-201ENST00000383940 103 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 RNU2-63P-201ENST00000410792 194 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 RNA5SP246-201ENST00000458909 119 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 AC011406.1-201ENST00000512440 370 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 Y_RNA.666-201ENST00000516187 112 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 SCARNA15-202ENST00000516881 127 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 CYP4A43P-201ENST00000568156 121 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 MIR3199-1-201ENST00000582434 88 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 MIR5197-201ENST00000583721 112 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 AC091178.1-203ENST00000584586 279 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 MIR8058-201ENST00000615737 89 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 AC134878.1-201ENST00000619901 243 ntBASIC4.11□□□□□ -1.75
PHOX2BQ99453 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHOX2BQ99453 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHOX2BQ99453 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHOX2BQ99453 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.11□□□□□ -1.75
PHOX2BQ99453 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PHOX2BQ99453 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHOX2BQ99453 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHOX2BQ99453 Y_RNA.366-201ENST00000365540 102 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 RNU6-905P-201ENST00000384434 107 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 MIR515-2-201ENST00000384883 83 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 MIR515-1-201ENST00000384884 83 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 AC060773.1-201ENST00000421698 310 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 AL353689.1-201ENST00000438895 199 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.1□□□□□ -1.75
PHOX2BQ99453 RNU6-970P-201ENST00000516312 107 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 RNU1-142P-201ENST00000516682 145 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 AC068657.1-201ENST00000520807 306 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 CYCSP30-201ENST00000546447 172 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 EIF4BP1-201ENST00000554881 351 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.1□□□□□ -1.75
PHOX2BQ99453 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PHOX2BQ99453 MIR6079-201ENST00000635807 62 ntBASIC4.1□□□□□ -1.75
PHOX2BQ99453 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHOX2BQ99453 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.1□□□□□ -1.75
PHOX2BQ99453 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHOX2BQ99453 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PHOX2BQ99453 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PHOX2BQ99453 AL365361.1-201ENST00000566942 3481 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.75
PHOX2BQ99453 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.09□□□□□ -1.75
PHOX2BQ99453 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.09□□□□□ -1.75
PHOX2BQ99453 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PHOX2BQ99453 MIR126-201ENST00000362291 85 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 RNU6-743P-201ENST00000364151 106 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 MIR218-1-201ENST00000384999 110 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 FTH1P12-201ENST00000432137 551 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 AC244505.4-201ENST00000434905 287 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 SSXP5-201ENST00000443473 287 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 AC091905.2-201ENST00000623143 306 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 MIR7515-201ENST00000637837 67 ntBASIC4.09□□□□□ -1.75
PHOX2BQ99453 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PHOX2BQ99453 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
PHOX2BQ99453 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PHOX2BQ99453 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHOX2BQ99453 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PHOX2BQ99453 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PHOX2BQ99453 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHOX2BQ99453 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHOX2BQ99453 RNU6-294P-201ENST00000364999 102 ntBASIC4.08□□□□□ -1.76
PHOX2BQ99453 EDDM3CP-201ENST00000415977 425 ntBASIC4.08□□□□□ -1.76
PHOX2BQ99453 AC099677.2-201ENST00000436385 175 ntBASIC4.08□□□□□ -1.76
PHOX2BQ99453 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
PHOX2BQ99453 AL353149.1-201ENST00000610667 244 ntBASIC4.08□□□□□ -1.76
PHOX2BQ99453 MAPK10-372ENST00000641954 3413 ntBASIC4.08□□□□□ -1.76
PHOX2BQ99453 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PHOX2BQ99453 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.08□□□□□ -1.76
PHOX2BQ99453 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.08□□□□□ -1.76
PHOX2BQ99453 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PHOX2BQ99453 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHOX2BQ99453 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHOX2BQ99453 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHOX2BQ99453 U8.6-201ENST00000364939 135 ntBASIC4.07□□□□□ -1.76
PHOX2BQ99453 Y_RNA.558-201ENST00000384685 113 ntBASIC4.07□□□□□ -1.76
PHOX2BQ99453 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PHOX2BQ99453 RPL39P34-201ENST00000477141 156 ntBASIC4.07□□□□□ -1.76
PHOX2BQ99453 RNU6-1291P-201ENST00000516591 104 ntBASIC4.07□□□□□ -1.76
PHOX2BQ99453 AP002004.2-201ENST00000531656 154 ntBASIC4.07□□□□□ -1.76
PHOX2BQ99453 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.07□□□□□ -1.76
PHOX2BQ99453 AC022217.4-201ENST00000604389 163 ntBASIC4.07□□□□□ -1.76
PHOX2BQ99453 MIR8057-201ENST00000620957 69 ntBASIC4.07□□□□□ -1.76
PHOX2BQ99453 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PHOX2BQ99453 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.07□□□□□ -1.76
PHOX2BQ99453 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PHOX2BQ99453 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHOX2BQ99453 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms