Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AC090574.1-201ENST00000623186 233 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.31-201ENST00000362574 102 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 SNORA33-201ENST00000363664 130 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 RNY1P14-201ENST00000384426 108 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 AL137792.2-201ENST00000443484 235 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 PCNPP5-201ENST00000452246 481 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 NDUFB4P10-201ENST00000452541 359 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 HMGN1P13-201ENST00000505795 138 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 MIR2355-201ENST00000517199 87 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 AC018448.1-201ENST00000552843 316 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 AL442163.3-201ENST00000554110 156 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 SNORD58B-201ENST00000607313 66 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 MIR338-201ENST00000636369 67 ntBASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NUDCD1Q96RS6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.395-201ENST00000383945 109 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.431-201ENST00000384086 102 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.460-201ENST00000384255 102 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 MIR1261-201ENST00000408659 82 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.639-201ENST00000458981 102 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 AC010469.2-201ENST00000496412 480 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 AC006157.1-201ENST00000611750 366 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 AC011476.5-201ENST00000615594 130 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 AC090971.5-201ENST00000621102 293 ntBASIC1.91□□□□□ -2.1
NUDCD1Q96RS6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.9□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.138-201ENST00000363462 102 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 RNU6-961P-201ENST00000363893 105 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 RNU6-474P-201ENST00000384243 107 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 RNY3P4-201ENST00000384428 101 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 RNU6-417P-201ENST00000384712 107 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 MIR628-201ENST00000385229 95 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 AL121890.1-201ENST00000435457 205 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 RNU6-625P-201ENST00000459412 107 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 AC110588.1-201ENST00000559699 137 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 VN1R91P-201ENST00000594377 169 ntBASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NUDCD1Q96RS6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 Y_RNA.112-201ENST00000363250 102 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 Y_RNA.498-201ENST00000384460 102 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 SNORA8-201ENST00000384574 139 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 RNA5SP100-201ENST00000410903 110 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 RNA5SP59-201ENST00000410922 110 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 RAB28P5-201ENST00000427490 651 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 AC007677.1-201ENST00000445757 515 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 RPL26P26-201ENST00000480251 434 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 AC107393.1-201ENST00000512403 346 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 AC074133.1-201ENST00000515696 183 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 RNU6-408P-201ENST00000515910 100 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 SUB1P4-201ENST00000566062 339 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 AC055872.1-201ENST00000570978 278 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 MIR5188-201ENST00000583467 113 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 AL353149.1-201ENST00000610667 244 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 AL773524.1-201ENST00000614065 229 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 U6.92-201ENST00000636464 89 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.89□□□□□ -2.11
NUDCD1Q96RS6 RNU1-96P-201ENST00000364163 162 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 RNU1-115P-201ENST00000365329 160 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 RNU6-1264P-201ENST00000383891 107 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 Y_RNA.445-201ENST00000384168 102 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 U8.13-201ENST00000390842 128 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 PMCHL1-202ENST00000423102 261 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 RNA5SP57-201ENST00000459463 123 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 AC010409.1-201ENST00000487382 476 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 RNU6-911P-201ENST00000516523 104 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 RNU6-1012P-201ENST00000516606 109 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 CYCSP23-201ENST00000519781 313 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 AL606534.2-204ENST00000635008 178 ntBASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NUDCD1Q96RS6 RNU6-454P-201ENST00000364292 107 ntBASIC1.87□□□□□ -2.11
NUDCD1Q96RS6 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms