Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MIR320B2-201ENST00000408479 138 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 AC123900.1-201ENST00000420390 96 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 PMCHL1-202ENST00000423102 261 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 MTCO1P44-201ENST00000441935 243 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 AC091179.3-201ENST00000474761 144 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 RNU6-911P-201ENST00000516523 104 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 RNU4-77P-201ENST00000516692 156 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 ANP32BP3-201ENST00000559213 706 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 AC008873.1-201ENST00000625051 138 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 RNU6-1301P-201ENST00000362724 104 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.128-201ENST00000363391 112 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 RNY3P11-201ENST00000364153 102 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 RNU6-1164P-201ENST00000364428 107 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 RNY1P14-201ENST00000384426 108 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 MIR586-201ENST00000385035 97 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 MIR1283-1-201ENST00000408494 87 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 MIR1283-2-201ENST00000408621 87 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 AL354751.2-201ENST00000415471 210 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 UBE2V1P7-201ENST00000446395 340 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 AC007395.1-201ENST00000451333 677 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 RNU7-87P-201ENST00000459343 62 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 RN7SKP49-201ENST00000516675 260 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 AC144568.1-201ENST00000520139 137 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 MIR5695-201ENST00000579717 85 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 MZT1P2-201ENST00000604387 248 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 AC010999.1-201ENST00000611856 324 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 AC134503.1-201ENST00000633048 54 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 MIR4272-201ENST00000635924 64 ntBASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
NECTIN4Q96NY8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.116-201ENST00000363292 103 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 SNORD114-6-201ENST00000364393 72 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.314-201ENST00000365114 102 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 RNU6-793P-201ENST00000384233 104 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 RNU6-1001P-201ENST00000411265 100 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AC114482.1-201ENST00000418010 247 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 BX510359.4-201ENST00000423750 193 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 MTND4P19-201ENST00000446659 478 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 HMGN2P9-201ENST00000476875 229 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AC093023.1-201ENST00000547375 507 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AC020661.2-201ENST00000560114 134 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AC044792.1-201ENST00000593294 196 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AC092447.9-201ENST00000603395 144 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 SNORD58B-201ENST00000607313 66 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 AC068205.3-201ENST00000636385 468 ntBASIC1.84□□□□□ -2.11
NECTIN4Q96NY8 RNA5SP361-201ENST00000362686 118 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.179-201ENST00000363844 90 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 RNU6-160P-201ENST00000384591 107 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 MCFD2P1-201ENST00000417812 300 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 NDUFB4P10-201ENST00000452541 359 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.631-201ENST00000459607 101 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 AC010531.2-201ENST00000465012 153 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 AC067942.3-201ENST00000512025 362 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 AL442163.3-201ENST00000554110 156 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 SNORD11B-201ENST00000607707 90 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 U2.1-201ENST00000618978 145 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 AL606534.2-204ENST00000635008 178 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 MTND5P35-201ENST00000557537 1720 ntBASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
NECTIN4Q96NY8 RNU6-1227P-201ENST00000383981 107 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.445-201ENST00000384168 102 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 RNU6-975P-201ENST00000384296 105 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 RNY3P4-201ENST00000384428 101 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 ELOCP21-201ENST00000412558 336 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 MTCO2P12-201ENST00000427426 682 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC096644.2-201ENST00000429278 159 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 RNU1-131P-201ENST00000458943 161 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 RNU7-169P-201ENST00000459456 61 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.683-201ENST00000516508 93 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms