Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 SNORA25.14-201ENST00000516481 132 ntBASIC0.96□□□□□ -2.26
USP47Q96K76 RNU6-165P-201ENST00000517170 99 ntBASIC0.96□□□□□ -2.26
USP47Q96K76 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.96□□□□□ -2.26
USP47Q96K76 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.96□□□□□ -2.26
USP47Q96K76 RN7SKP299-201ENST00000606679 301 ntBASIC0.96□□□□□ -2.26
USP47Q96K76 AL021879.1-201ENST00000611756 288 ntBASIC0.96□□□□□ -2.26
USP47Q96K76 AC027335.2-201ENST00000624030 375 ntBASIC0.96□□□□□ -2.26
USP47Q96K76 AC097520.1-201ENST00000624435 385 ntBASIC0.96□□□□□ -2.26
USP47Q96K76 MIR3974-201ENST00000637126 96 ntBASIC0.96□□□□□ -2.26
USP47Q96K76 Y_RNA.77-201ENST00000362962 107 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 Y_RNA.151-201ENST00000363566 112 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 RNU6-1085P-201ENST00000363576 107 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 SNORA70.7-201ENST00000384159 133 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 RNU6-648P-201ENST00000410190 107 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 Z82188.1-201ENST00000436709 154 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.95□□□□□ -2.26
USP47Q96K76 RNU6-58P-201ENST00000517143 103 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.95□□□□□ -2.26
USP47Q96K76 AC004812.1-201ENST00000540773 146 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 MTND1P15-201ENST00000579262 949 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 AL390123.1-201ENST00000603216 237 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 RNU6-89P-201ENST00000606519 100 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 AL158209.2-201ENST00000619266 216 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 MIR924-201ENST00000638017 53 ntBASIC0.95□□□□□ -2.26
USP47Q96K76 RNU6-254P-201ENST00000363377 107 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 Y_RNA.373-201ENST00000365600 103 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 RNU6-245P-201ENST00000384020 107 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 MIR514A2-201ENST00000385131 88 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 MIR514A3-201ENST00000385132 88 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 MIR1185-2-201ENST00000408687 86 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 RNA5SP193-201ENST00000410353 107 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.94□□□□□ -2.26
USP47Q96K76 AC245047.3-201ENST00000429428 127 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 SNORD116-28-201ENST00000516123 91 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 RNU6-1198P-201ENST00000516904 67 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 SNORA70.22-201ENST00000517160 124 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 RNA5SP454-201ENST00000517231 127 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.94□□□□□ -2.26
USP47Q96K76 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 AC106754.2-201ENST00000623006 233 ntBASIC0.94□□□□□ -2.26
USP47Q96K76 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
USP47Q96K76 SNORD115-8-201ENST00000363856 82 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 Y_RNA.258-201ENST00000364613 105 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 SNORD115-38-201ENST00000365037 82 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
USP47Q96K76 MRPL42P3-201ENST00000401492 326 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 RNU6-1068P-201ENST00000410958 103 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.93□□□□□ -2.26
USP47Q96K76 AC079354.2-201ENST00000453523 154 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 PCMTD1P1-201ENST00000455560 355 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 AK6P2-201ENST00000549020 471 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.93□□□□□ -2.26
USP47Q96K76 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.93□□□□□ -2.26
USP47Q96K76 FRG2DP-202ENST00000566967 323 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 MIR4711-201ENST00000578274 70 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 U6.73-201ENST00000619194 103 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 SNORD3E-202ENST00000627253 216 ntBASIC0.93□□□□□ -2.26
USP47Q96K76 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
USP47Q96K76 RNU6-727P-201ENST00000363592 107 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 Y_RNA.231-201ENST00000364358 102 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 RNU6-522P-201ENST00000364497 107 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 RNU4-9P-201ENST00000364951 139 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 RNU6-1042P-201ENST00000384204 107 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 MTCO1P20-201ENST00000425366 358 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.92□□□□□ -2.26
USP47Q96K76 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.92□□□□□ -2.26
USP47Q96K76 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
USP47Q96K76 MTCO2P30-201ENST00000503662 364 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 RNU7-99P-201ENST00000516271 62 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.92□□□□□ -2.26
USP47Q96K76 AL158211.1-201ENST00000566763 763 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 MIR5695-201ENST00000579717 85 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 AL109933.3-201ENST00000619095 188 ntBASIC0.92□□□□□ -2.26
USP47Q96K76 MTND5P26-201ENST00000426018 1752 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 U3.8-201ENST00000363675 217 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 Y_RNA.372-201ENST00000365599 102 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 RNU6-128P-201ENST00000383976 107 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 MTCO3P40-201ENST00000392516 676 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 AL034345.1-201ENST00000407768 123 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.91□□□□□ -2.26
USP47Q96K76 ERLEC1P1-201ENST00000433806 578 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 MTND5P15-201ENST00000434246 349 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.91□□□□□ -2.26
USP47Q96K76 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.91□□□□□ -2.26
USP47Q96K76 RNU6-922P-201ENST00000516753 99 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 RNU7-128P-201ENST00000517247 62 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.91□□□□□ -2.26
USP47Q96K76 AC004584.2-201ENST00000570407 410 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.91□□□□□ -2.26
USP47Q96K76 MIR3611-201ENST00000584484 83 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 AL513534.2-201ENST00000603836 250 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 AC124864.2-201ENST00000624736 186 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 AC099654.12-201ENST00000639868 649 ntBASIC0.91□□□□□ -2.26
USP47Q96K76 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
USP47Q96K76 RNA5SP347-201ENST00000362445 119 ntBASIC0.9□□□□□ -2.27
USP47Q96K76 RNA5SP257-201ENST00000363023 116 ntBASIC0.9□□□□□ -2.27
USP47Q96K76 RNU6-1252P-201ENST00000363054 104 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms