Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 SNORD68-201ENST00000363214 84 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 U8.5-201ENST00000364528 136 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 RNU4-16P-201ENST00000364737 141 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 RNA5SP144-201ENST00000410846 116 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 MIR4777-201ENST00000583710 86 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 AL138721.1-201ENST00000616756 179 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 AL031595.2-201ENST00000624215 19071 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 AL355596.1-201ENST00000565399 3996 ntBASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 Y_RNA.190-201ENST00000363964 101 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 RNA5SP51-201ENST00000364750 119 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 SNORD96B-201ENST00000386148 79 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 RPS12P18-201ENST00000442381 270 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 AL357552.1-201ENST00000445254 415 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 AC004812.1-201ENST00000540773 146 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 AC096720.1-201ENST00000604441 183 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 AC005000.2-201ENST00000605468 310 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MS4A4AQ96JQ5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 SNORA1B-201ENST00000362535 133 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 SNORD116-10-201ENST00000363791 102 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 MIR634-201ENST00000385208 97 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 SNRPGP14-201ENST00000435400 219 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 AL161788.1-201ENST00000441805 169 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 Y_RNA.659-201ENST00000515994 113 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 RNU6-1018P-201ENST00000516577 106 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 MIR4668-201ENST00000582284 70 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 AC140113.4-201ENST00000622087 222 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 MAPK10-303ENST00000641324 3959 ntBASIC4.53□□□□□ -1.68
MS4A4AQ96JQ5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 MIR515-2-201ENST00000384883 83 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 MIR515-1-201ENST00000384884 83 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 MIR605-201ENST00000385078 83 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 Y_RNA.620-201ENST00000411009 88 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 PHBP14-201ENST00000512887 367 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 MIR4439-201ENST00000583746 80 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 MIR4298-201ENST00000584380 73 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 Y_RNA.773-201ENST00000607168 90 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 MIR7702-201ENST00000621931 59 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 MIR3651-201ENST00000630427 90 ntBASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
MS4A4AQ96JQ5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 RNU1-72P-201ENST00000362976 153 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 RNA5SP323-201ENST00000391094 133 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 AC083863.1-201ENST00000438811 231 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 SNORA31.1-201ENST00000515993 133 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 RN7SKP18-201ENST00000516005 275 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 SNORA31.5-201ENST00000516190 133 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 RNU6-267P-201ENST00000516714 103 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 MIR4472-2-201ENST00000582069 67 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 MIR548Z-201ENST00000584743 97 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 AC006272.2-201ENST00000594725 163 ntBASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MS4A4AQ96JQ5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 RNU6-743P-201ENST00000364151 106 ntBASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 SNORD77B-201ENST00000391112 67 ntBASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 SNX2P2-201ENST00000424553 323 ntBASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 RPL23AP63-201ENST00000498752 471 ntBASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 SNORD45.4-201ENST00000516629 73 ntBASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.5□□□□□ -1.69
MS4A4AQ96JQ5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
MS4A4AQ96JQ5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MS4A4AQ96JQ5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MS4A4AQ96JQ5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
MS4A4AQ96JQ5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
MS4A4AQ96JQ5 MIR342-201ENST00000362212 99 ntBASIC4.49□□□□□ -1.69
MS4A4AQ96JQ5 RNA5SP467-201ENST00000391274 118 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms