Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.27□□□□□ -1.73
LRCH3Q96II8 AC022217.4-201ENST00000604389 163 ntBASIC4.27□□□□□ -1.73
LRCH3Q96II8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRCH3Q96II8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.27□□□□□ -1.73
LRCH3Q96II8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRCH3Q96II8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRCH3Q96II8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRCH3Q96II8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRCH3Q96II8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.27□□□□□ -1.73
LRCH3Q96II8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LRCH3Q96II8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRCH3Q96II8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRCH3Q96II8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.26□□□□□ -1.73
LRCH3Q96II8 AP003122.5-201ENST00000527668 3766 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.26□□□□□ -1.73
LRCH3Q96II8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.26□□□□□ -1.73
LRCH3Q96II8 RNA5SP97-201ENST00000365006 84 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 Y_RNA.360-201ENST00000365512 102 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 Y_RNA.426-201ENST00000384068 113 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 Y_RNA.454-201ENST00000384224 113 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 SNORA74C-2-201ENST00000411179 201 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 SNRPGP5-201ENST00000456003 220 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 RNU1-131P-201ENST00000458943 161 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 AC010401.1-201ENST00000463867 348 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 MIR3690-201ENST00000580266 75 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 MIR4777-201ENST00000583710 86 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 AC087741.2-201ENST00000619415 172 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.26□□□□□ -1.73
LRCH3Q96II8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRCH3Q96II8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LRCH3Q96II8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LRCH3Q96II8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRCH3Q96II8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.25□□□□□ -1.73
LRCH3Q96II8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.25□□□□□ -1.73
LRCH3Q96II8 AL049781.1-201ENST00000623195 3585 ntBASIC4.25□□□□□ -1.73
LRCH3Q96II8 RNU6-60P-201ENST00000364792 103 ntBASIC4.25□□□□□ -1.73
LRCH3Q96II8 AC025627.2-201ENST00000576220 160 ntBASIC4.25□□□□□ -1.73
LRCH3Q96II8 MIR3618-201ENST00000580330 88 ntBASIC4.25□□□□□ -1.73
LRCH3Q96II8 AL137849.1-201ENST00000604767 169 ntBASIC4.25□□□□□ -1.73
LRCH3Q96II8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.25□□□□□ -1.73
LRCH3Q96II8 MIR1255B1-201ENST00000636325 63 ntBASIC4.25□□□□□ -1.73
LRCH3Q96II8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRCH3Q96II8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRCH3Q96II8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRCH3Q96II8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.25□□□□□ -1.73
LRCH3Q96II8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRCH3Q96II8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRCH3Q96II8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.24□□□□□ -1.73
LRCH3Q96II8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LRCH3Q96II8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRCH3Q96II8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
LRCH3Q96II8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRCH3Q96II8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRCH3Q96II8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRCH3Q96II8 Y_RNA.155-201ENST00000363632 101 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 MIR548O-201ENST00000408583 114 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 COTL1P1-201ENST00000422309 375 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 AP000873.1-201ENST00000463987 400 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 RN7SL271P-201ENST00000487601 295 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
LRCH3Q96II8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.24□□□□□ -1.73
LRCH3Q96II8 MIR3683-201ENST00000580847 82 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 AC091304.10-201ENST00000641554 121 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRCH3Q96II8 Z82217.1-201ENST00000625157 8149 ntBASIC4.24□□□□□ -1.73
LRCH3Q96II8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRCH3Q96II8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRCH3Q96II8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRCH3Q96II8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 Y_RNA.242-201ENST00000364473 110 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 RNA5SP189-201ENST00000364920 115 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 RNU6-733P-201ENST00000410759 104 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 Y_RNA.620-201ENST00000411009 88 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 RNU2-11P-201ENST00000459191 187 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 YPEL5P3-201ENST00000547227 352 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 MIR3945-201ENST00000581853 98 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 AC073413.2-201ENST00000604332 360 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 AC090115.4-201ENST00000609970 188 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.23□□□□□ -1.73
LRCH3Q96II8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRCH3Q96II8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRCH3Q96II8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRCH3Q96II8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
LRCH3Q96II8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRCH3Q96II8 MIR93-201ENST00000385024 80 ntBASIC4.22□□□□□ -1.73
LRCH3Q96II8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRCH3Q96II8 SNORD66.1-201ENST00000391230 76 ntBASIC4.22□□□□□ -1.73
LRCH3Q96II8 MIR889-201ENST00000401280 79 ntBASIC4.22□□□□□ -1.73
LRCH3Q96II8 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
LRCH3Q96II8 AC233266.1-201ENST00000454518 96 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms