Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AL691482.1-201ENST00000453255 87 ntBASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 RN7SL329P-201ENST00000467740 299 ntBASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 RN7SL303P-201ENST00000469773 251 ntBASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 RN7SL319P-201ENST00000480656 221 ntBASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 AC007448.1-201ENST00000582714 234 ntBASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.35□□□□□ -1.71
MS4A3Q96HJ5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 SNORA58B-201ENST00000364259 136 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 RNA5SP292-201ENST00000390974 118 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 U3.30-201ENST00000391308 210 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 RN7SL441P-201ENST00000492388 296 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 ENPP7P9-201ENST00000514456 627 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 TVP23BP1-201ENST00000557500 617 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 AC091905.4-201ENST00000623432 202 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 AC140479.6-201ENST00000633535 357 ntBASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
MS4A3Q96HJ5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
MS4A3Q96HJ5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
MS4A3Q96HJ5 Z83843.1-201ENST00000604070 3685 ntBASIC4.34□□□□□ -1.72
MS4A3Q96HJ5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
MS4A3Q96HJ5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 PWAR6-201ENST00000552334 4618 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 RNU1-105P-201ENST00000363470 161 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 RNA5SP322-201ENST00000363617 119 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 SNORA8.1-201ENST00000384250 140 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 AL645733.1-201ENST00000402250 217 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 AL590139.1-201ENST00000416267 400 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 STAG3L5P-204ENST00000443759 179 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 HMGN2P16-201ENST00000456802 261 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 RN7SL826P-201ENST00000479724 288 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 RN7SL97P-201ENST00000486780 299 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 AC140172.1-201ENST00000502928 141 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 SNORA18.5-201ENST00000516616 101 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 CYCSP40-201ENST00000575927 294 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 SNORA28-201ENST00000606769 126 ntBASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A3Q96HJ5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 CKS1BP6-201ENST00000424932 240 ntBASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 MIR4646-201ENST00000580775 63 ntBASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 MIR4436B2-201ENST00000581415 91 ntBASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 MIR4436B1-201ENST00000583272 91 ntBASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 AP000753.3-201ENST00000604083 169 ntBASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.32□□□□□ -1.72
MS4A3Q96HJ5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 Y_RNA.354-201ENST00000365448 111 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 RNU6-669P-201ENST00000365575 107 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 CD24P4-201ENST00000382840 243 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 RNA5SP38-201ENST00000410750 119 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 AL590762.4-201ENST00000425885 253 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 AC015818.7-201ENST00000428754 109 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 AL606517.2-201ENST00000442855 241 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 RPS29P11-201ENST00000496507 171 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 AC067747.1-201ENST00000608026 250 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 LINC00901.1-201ENST00000617252 152 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 AC019206.1-201ENST00000621938 425 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 AL355596.1-201ENST00000565399 3996 ntBASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A3Q96HJ5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms