Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNU6-475P-201ENST00000516073 104 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 SNORA25.14-201ENST00000516481 132 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 AL442163.3-201ENST00000554110 156 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 AC006600.1-201ENST00000572529 153 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 MIR4513-201ENST00000581077 86 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 SNRPGP20-201ENST00000604477 205 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 AC103810.8-201ENST00000607347 118 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 AC040896.1-201ENST00000613819 479 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 AC005562.2-201ENST00000618264 111 ntBASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.8□□□□□ -2.12
PDLIM5Q96HC4 SNORA63-201ENST00000363450 132 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 Y_RNA.158-201ENST00000363651 101 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 RNU6-280P-201ENST00000364145 104 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 SNORA70B-201ENST00000384210 135 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 SNORA67.2-201ENST00000384300 149 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 RNA5SP100-201ENST00000410903 110 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 RNA5SP59-201ENST00000410922 110 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 AC010095.1-201ENST00000443543 144 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 AC022868.1-201ENST00000517767 391 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 AC026470.2-201ENST00000561492 181 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 MIR5695-201ENST00000579717 85 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 MZT1P2-201ENST00000604387 248 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PDLIM5Q96HC4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 RNU6-661P-201ENST00000362409 107 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 RNU1-62P-201ENST00000362599 164 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 RNA5SP361-201ENST00000362686 118 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 SNORA63C-201ENST00000364578 129 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 RNY3P4-201ENST00000384428 101 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 MIR934-201ENST00000401241 83 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 EBAG9P1-201ENST00000418955 543 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 AC010469.2-201ENST00000496412 480 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 AC093852.1-201ENST00000503587 266 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 RN7SKP49-201ENST00000516675 260 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 AC093023.1-201ENST00000547375 507 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 MIR4680-201ENST00000580906 66 ntBASIC1.78□□□□□ -2.12
PDLIM5Q96HC4 AL356292.1-201ENST00000283110 373 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 Y_RNA.422-201ENST00000384054 114 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 RNU6-823P-201ENST00000391042 103 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 MIR300-201ENST00000401138 83 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 RNA5SP504-201ENST00000410676 117 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 RNU6-1001P-201ENST00000411265 100 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AC009237.7-201ENST00000447357 229 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AC016925.1-201ENST00000458303 298 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AC091179.3-201ENST00000474761 144 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AC110588.1-201ENST00000559699 137 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 SUB1P4-201ENST00000566062 339 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 MIR4419B-201ENST00000577260 68 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 MIR5006-201ENST00000583027 110 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AC010999.1-201ENST00000611856 324 ntBASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PDLIM5Q96HC4 AL159152.1-201ENST00000635019 2587 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 RNU6-879P-201ENST00000364328 108 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 SNORD14.1-201ENST00000365609 90 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 RNU6-639P-201ENST00000384074 107 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 RNU6-738P-201ENST00000384531 106 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 MIR606-201ENST00000384851 96 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 RNU6-985P-201ENST00000410182 104 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 MTCO3P19-201ENST00000415864 321 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 TRBV12-1-201ENST00000479785 344 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 RNU6-344P-201ENST00000516635 111 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 AC040926.1-201ENST00000530195 238 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 AK6P2-201ENST00000549020 471 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 RRN3P3-201ENST00000549207 578 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 MIR5094-201ENST00000578766 85 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 AL357075.2-201ENST00000614906 189 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 AL138825.1-201ENST00000618587 192 ntBASIC1.76□□□□□ -2.13
PDLIM5Q96HC4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms