Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.570-201ENST00000384750 101 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 RNU2-20P-201ENST00000410425 191 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.59□□□□□ -1.99
HPS3Q969F9 DYNLT3P2-201ENST00000442517 295 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 RNU1-131P-201ENST00000458943 161 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 SEPT14P8-201ENST00000508026 178 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.59□□□□□ -1.99
HPS3Q969F9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.59□□□□□ -1.99
HPS3Q969F9 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 MIR4423-201ENST00000580922 80 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 MIR4300-201ENST00000581016 96 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.59□□□□□ -1.99
HPS3Q969F9 MIR6895-201ENST00000613497 78 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 AC022202.1-201ENST00000613515 211 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 AC245884.12-201ENST00000615364 59 ntBASIC2.59□□□□□ -1.99
HPS3Q969F9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
HPS3Q969F9 AC016717.2-201ENST00000609089 5141 ntBASIC2.58□□□□□ -2
HPS3Q969F9 Y_RNA.574-201ENST00000384766 95 ntBASIC2.58□□□□□ -2
HPS3Q969F9 SNORD115-46-201ENST00000390982 71 ntBASIC2.58□□□□□ -2
HPS3Q969F9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
HPS3Q969F9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.58□□□□□ -2
HPS3Q969F9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.58□□□□□ -2
HPS3Q969F9 AC005042.3-201ENST00000453230 174 ntBASIC2.58□□□□□ -2
HPS3Q969F9 LINC01399-202ENST00000458450 244 ntBASIC2.58□□□□□ -2
HPS3Q969F9 RNU6-856P-201ENST00000516959 98 ntBASIC2.58□□□□□ -2
HPS3Q969F9 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
HPS3Q969F9 AC136932.1-201ENST00000574771 208 ntBASIC2.58□□□□□ -2
HPS3Q969F9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.58□□□□□ -2
HPS3Q969F9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.58□□□□□ -2
HPS3Q969F9 AC022441.3-201ENST00000605737 136 ntBASIC2.58□□□□□ -2
HPS3Q969F9 SNORD113-5-201ENST00000607261 78 ntBASIC2.58□□□□□ -2
HPS3Q969F9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.58□□□□□ -2
HPS3Q969F9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
HPS3Q969F9 CTSLP2-204ENST00000629029 392 ntBASIC2.58□□□□□ -2
HPS3Q969F9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
HPS3Q969F9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
HPS3Q969F9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.57□□□□□ -2
HPS3Q969F9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HPS3Q969F9 U8.2-201ENST00000363156 134 ntBASIC2.57□□□□□ -2
HPS3Q969F9 Y_RNA.133-201ENST00000363428 110 ntBASIC2.57□□□□□ -2
HPS3Q969F9 MIR1302-3-201ENST00000408128 138 ntBASIC2.57□□□□□ -2
HPS3Q969F9 RNU2-54P-201ENST00000410299 190 ntBASIC2.57□□□□□ -2
HPS3Q969F9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.57□□□□□ -2
HPS3Q969F9 MTND3P2-201ENST00000438452 342 ntBASIC2.57□□□□□ -2
HPS3Q969F9 SUMO1P2-201ENST00000452524 304 ntBASIC2.57□□□□□ -2
HPS3Q969F9 AC025647.1-201ENST00000517879 253 ntBASIC2.57□□□□□ -2
HPS3Q969F9 AP002001.1-203ENST00000534002 267 ntBASIC2.57□□□□□ -2
HPS3Q969F9 SNORD14A-201ENST00000606526 91 ntBASIC2.57□□□□□ -2
HPS3Q969F9 AC006001.4-201ENST00000622243 395 ntBASIC2.57□□□□□ -2
HPS3Q969F9 U6.104-201ENST00000637979 90 ntBASIC2.57□□□□□ -2
HPS3Q969F9 AL159152.1-201ENST00000635019 2587 ntBASIC2.57□□□□□ -2
HPS3Q969F9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.57□□□□□ -2
HPS3Q969F9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.56□□□□□ -2
HPS3Q969F9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HPS3Q969F9 AC245060.5-201ENST00000610778 3293 ntBASIC2.56□□□□□ -2
HPS3Q969F9 MIR340-201ENST00000362125 95 ntBASIC2.56□□□□□ -2
HPS3Q969F9 Y_RNA.47-201ENST00000362697 108 ntBASIC2.56□□□□□ -2
HPS3Q969F9 Y_RNA.64-201ENST00000362845 102 ntBASIC2.56□□□□□ -2
HPS3Q969F9 SNORD113-8-201ENST00000363497 74 ntBASIC2.56□□□□□ -2
HPS3Q969F9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.56□□□□□ -2
HPS3Q969F9 Y_RNA.331-201ENST00000365267 102 ntBASIC2.56□□□□□ -2
HPS3Q969F9 SNORA6-201ENST00000384033 151 ntBASIC2.56□□□□□ -2
HPS3Q969F9 Y_RNA.446-201ENST00000384178 104 ntBASIC2.56□□□□□ -2
HPS3Q969F9 MIR1253-201ENST00000408273 105 ntBASIC2.56□□□□□ -2
HPS3Q969F9 AL135786.1-201ENST00000415892 214 ntBASIC2.56□□□□□ -2
HPS3Q969F9 AC025465.3-201ENST00000510570 311 ntBASIC2.56□□□□□ -2
HPS3Q969F9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
HPS3Q969F9 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
HPS3Q969F9 MTCO2P24-201ENST00000515611 426 ntBASIC2.56□□□□□ -2
HPS3Q969F9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.56□□□□□ -2
HPS3Q969F9 RNU6-155P-201ENST00000516347 100 ntBASIC2.56□□□□□ -2
HPS3Q969F9 AP003733.2-201ENST00000529409 171 ntBASIC2.56□□□□□ -2
HPS3Q969F9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.56□□□□□ -2
HPS3Q969F9 AC009127.3-201ENST00000570531 403 ntBASIC2.56□□□□□ -2
HPS3Q969F9 AC055872.1-201ENST00000570978 278 ntBASIC2.56□□□□□ -2
HPS3Q969F9 AC008749.1-201ENST00000597650 306 ntBASIC2.56□□□□□ -2
HPS3Q969F9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.56□□□□□ -2
HPS3Q969F9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
HPS3Q969F9 Y_RNA.101-201ENST00000363154 102 ntBASIC2.55□□□□□ -2
HPS3Q969F9 RNU6-23P-201ENST00000363283 107 ntBASIC2.55□□□□□ -2
HPS3Q969F9 RNU6-454P-201ENST00000364292 107 ntBASIC2.55□□□□□ -2
HPS3Q969F9 MIR504-201ENST00000385065 83 ntBASIC2.55□□□□□ -2
HPS3Q969F9 Y_RNA.602-201ENST00000410535 92 ntBASIC2.55□□□□□ -2
HPS3Q969F9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.55□□□□□ -2
HPS3Q969F9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.55□□□□□ -2
HPS3Q969F9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.55□□□□□ -2
HPS3Q969F9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.55□□□□□ -2
HPS3Q969F9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.55□□□□□ -2
HPS3Q969F9 RNU6-237P-201ENST00000515985 71 ntBASIC2.55□□□□□ -2
HPS3Q969F9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.55□□□□□ -2
HPS3Q969F9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HPS3Q969F9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.55□□□□□ -2
HPS3Q969F9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HPS3Q969F9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
HPS3Q969F9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.54□□□□□ -2
HPS3Q969F9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
HPS3Q969F9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 791.7 ms