Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
DDX1Q92499 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DDX1Q92499 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
DDX1Q92499 AC092435.3-201ENST00000565538 3654 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DDX1Q92499 Y_RNA.179-201ENST00000363844 90 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 RNU6-899P-201ENST00000363947 107 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 RNU6-801P-201ENST00000364087 105 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 SNORA72.2-201ENST00000365028 127 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 Y_RNA.498-201ENST00000384460 102 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 RNU6-1248P-201ENST00000391096 64 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AL135790.2-201ENST00000437701 267 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 UQCRHP3-201ENST00000451503 251 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AC080013.2-201ENST00000460866 323 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AC091179.1-201ENST00000461606 579 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AC103975.1-201ENST00000482506 483 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.26□□□□□ -1.89
DDX1Q92499 CKS1BP2-201ENST00000497342 240 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AC023141.11-201ENST00000508864 202 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 RNU6-1333P-201ENST00000516162 93 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 RNU6-155P-201ENST00000516347 100 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 RNU2-12P-201ENST00000517216 168 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
DDX1Q92499 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
DDX1Q92499 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX1Q92499 Y_RNA.329-201ENST00000365209 107 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 RNU6-1310P-201ENST00000384153 107 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 RNU6-793P-201ENST00000384233 104 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 RNU6-586P-201ENST00000517265 104 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 AC022616.8-201ENST00000533569 253 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 RPL17P51-201ENST00000605218 238 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 AC007318.2-201ENST00000620999 243 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 AL136360.1-201ENST00000503377 1900 ntBASIC3.25□□□□□ -1.89
DDX1Q92499 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
DDX1Q92499 RNU6-1325P-201ENST00000364905 105 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 MIR549A-201ENST00000385268 96 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 RNU6-578P-201ENST00000390980 103 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 AC027124.2-201ENST00000428249 105 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 RNU7-197P-201ENST00000458836 62 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX1Q92499 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.24□□□□□ -1.89
DDX1Q92499 TCL6_2.1-201ENST00000615162 119 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 AC005562.2-201ENST00000618264 111 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DDX1Q92499 AC138915.1-201ENST00000565427 1685 ntBASIC3.24□□□□□ -1.89
DDX1Q92499 RNU1-62P-201ENST00000362599 164 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 RNU6-454P-201ENST00000364292 107 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 snoU2_19.4-201ENST00000364329 80 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 SNORA18.3-201ENST00000384122 132 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 RNA5SP508-201ENST00000411327 119 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 CYP2C59P-201ENST00000457790 269 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 Y_RNA.797-201ENST00000515977 94 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 RN7SKP164-201ENST00000516138 266 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 RN7SKP43-201ENST00000516173 320 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 AC136628.3-201ENST00000521868 290 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 AC021269.2-201ENST00000532318 330 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX1Q92499 AC112693.2-201ENST00000556538 232 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX1Q92499 AC009127.3-201ENST00000570531 403 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 MIR4744-201ENST00000581563 82 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX1Q92499 MIR3616-201ENST00000584070 92 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 DNAJC19P2-201ENST00000593340 302 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 AL359881.1-201ENST00000602916 267 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 AC008873.1-201ENST00000625051 138 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 MIR3658-201ENST00000636291 56 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 MIR3674-201ENST00000636576 68 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 AP006437.1-201ENST00000641440 3685 ntBASIC3.23□□□□□ -1.89
DDX1Q92499 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX1Q92499 AC009487.2-201ENST00000420969 6821 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX1Q92499 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX1Q92499 RNU6-834P-201ENST00000362367 110 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 Y_RNA.172-201ENST00000363765 102 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 RNU4-11P-201ENST00000365287 132 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 Y_RNA.542-201ENST00000384641 111 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 Y_RNA.563-201ENST00000384707 108 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 MIR626-201ENST00000385032 94 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 SNORA26.5-201ENST00000391215 123 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 MIR1294-201ENST00000408503 142 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 U3.40-201ENST00000408706 208 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 RN7SKP220-201ENST00000410611 288 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX1Q92499 RNU6-1234P-201ENST00000516877 103 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 GTF3AP2-201ENST00000557014 266 ntBASIC3.22□□□□□ -1.89
DDX1Q92499 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
DDX1Q92499 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
DDX1Q92499 RNU6-103P-201ENST00000363686 107 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 SNORA12-201ENST00000391162 147 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 FO393413.1-201ENST00000402892 195 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 RNA5SP184-201ENST00000411071 108 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 RPL30P13-201ENST00000418873 348 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 AC004386.2-201ENST00000441858 148 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 AC074290.1-201ENST00000448883 135 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 AC090515.1-201ENST00000465295 476 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 AC008885.1-201ENST00000514930 301 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms