Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 Y_RNA.787-201ENST00000616522 101 ntBASIC2.11□□□□□ -2.07
BEST2Q8NFU1 Y_RNA.780-201ENST00000617336 101 ntBASIC2.11□□□□□ -2.07
BEST2Q8NFU1 Y_RNA.801-201ENST00000619005 101 ntBASIC2.11□□□□□ -2.07
BEST2Q8NFU1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.11□□□□□ -2.07
BEST2Q8NFU1 U3.8-201ENST00000363675 217 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 SNORD114-6-201ENST00000364393 72 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 RNU6-639P-201ENST00000384074 107 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 Y_RNA.527-201ENST00000384573 102 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 RNU6-823P-201ENST00000391042 103 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AL590004.1-201ENST00000405321 300 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 RNU6-101P-201ENST00000410323 104 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 SDAD1P3-201ENST00000427380 333 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 MTCO1P44-201ENST00000441935 243 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 RNU6-625P-201ENST00000459412 107 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AC093852.1-201ENST00000503587 266 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AC074133.1-201ENST00000515696 183 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 RNU6-1137P-201ENST00000517073 99 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.1□□□□□ -2.07
BEST2Q8NFU1 MIR6845-201ENST00000613182 61 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AC240442.1-201ENST00000616055 283 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AL590240.4-201ENST00000616908 390 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AL162373.1-201ENST00000620433 407 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 AC130454.1-201ENST00000622948 401 ntBASIC2.1□□□□□ -2.07
BEST2Q8NFU1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
BEST2Q8NFU1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
BEST2Q8NFU1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
BEST2Q8NFU1 RNU6-961P-201ENST00000363893 105 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 RNU4-50P-201ENST00000364361 141 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 RNU6-160P-201ENST00000384591 107 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 RNU6-57P-201ENST00000411348 103 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.09□□□□□ -2.07
BEST2Q8NFU1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.09□□□□□ -2.07
BEST2Q8NFU1 RNU6-948P-201ENST00000516374 107 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.09□□□□□ -2.07
BEST2Q8NFU1 AC022432.1-201ENST00000595739 310 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 AL353621.2-201ENST00000605340 133 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
BEST2Q8NFU1 AC007742.2-201ENST00000618226 398 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
BEST2Q8NFU1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST2Q8NFU1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
BEST2Q8NFU1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 Y_RNA.471-201ENST00000384312 102 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 MIR29C-201ENST00000385231 88 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 RNU6-482P-201ENST00000391068 107 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 HMGN2P39-201ENST00000398005 273 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AL445685.2-201ENST00000422551 342 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 RAB28P5-201ENST00000427490 651 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AL357134.1-201ENST00000445848 426 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 NDUFB4P10-201ENST00000452541 359 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 RPL26P26-201ENST00000480251 434 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AC067942.3-201ENST00000512025 362 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 Y_RNA.715-201ENST00000517082 110 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AC022616.4-201ENST00000522985 181 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AC087441.2-201ENST00000529141 262 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AL109918.3-201ENST00000603072 338 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 AC099654.10-201ENST00000640395 161 ntBASIC2.08□□□□□ -2.08
BEST2Q8NFU1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
BEST2Q8NFU1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
BEST2Q8NFU1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
BEST2Q8NFU1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
BEST2Q8NFU1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
BEST2Q8NFU1 RNU6-23P-201ENST00000363283 107 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 Y_RNA.455-201ENST00000384230 98 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 Y_RNA.458-201ENST00000384240 102 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
BEST2Q8NFU1 MIR1185-2-201ENST00000408687 86 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 RPEP5-201ENST00000441137 268 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 RNU6-498P-201ENST00000459468 107 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 Y_RNA.721-201ENST00000517207 102 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 AP005660.1-201ENST00000522972 293 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 AP002001.1-203ENST00000534002 267 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.07□□□□□ -2.08
BEST2Q8NFU1 AC110588.1-201ENST00000559699 137 ntBASIC2.07□□□□□ -2.08
BEST2Q8NFU1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.07□□□□□ -2.08
BEST2Q8NFU1 AC006504.6-201ENST00000590142 199 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms