Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3□□□□□ -1.93
SMC1BQ8NDV3 Z82195.2-201ENST00000612348 18351 ntBASIC3□□□□□ -1.93
SMC1BQ8NDV3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 RNU6-290P-201ENST00000365212 101 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.331-201ENST00000365267 102 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 SNORA53-201ENST00000391141 249 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AL590004.2-201ENST00000404787 371 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AL357139.1-201ENST00000407792 426 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 MIR1283-1-201ENST00000408494 87 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 RNU4-30P-201ENST00000410245 143 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AC092427.1-202ENST00000430569 476 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AC005042.3-201ENST00000453230 174 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AC023157.2-201ENST00000540596 141 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AC006380.1-201ENST00000603598 186 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AC037487.3-201ENST00000606668 112 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AC090115.4-201ENST00000609970 188 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 AC092881.1-201ENST00000638218 2733 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 WWP1P1-201ENST00000466609 2769 ntBASIC2.99□□□□□ -1.93
SMC1BQ8NDV3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 MTND5P6-201ENST00000422338 1798 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 AL391987.6-201ENST00000305671 199 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 RNU6-545P-201ENST00000362681 104 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 SNORD31B-201ENST00000364977 69 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.350-201ENST00000365409 98 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 RNU6-438P-201ENST00000365561 103 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 SNORA67.2-201ENST00000384300 149 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.476-201ENST00000384347 108 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.489-201ENST00000384410 101 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 RNU2-38P-201ENST00000410856 79 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 RPL39P38-201ENST00000467018 153 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 AL109918.3-201ENST00000603072 338 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 AC022441.3-201ENST00000605737 136 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 AC091932.3-201ENST00000624223 323 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 AL161431.1-201ENST00000618966 4205 ntBASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMC1BQ8NDV3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 MIR335-201ENST00000362173 94 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 MIR337-201ENST00000362281 93 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.14-201ENST00000362415 103 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 RNU1-23P-201ENST00000363361 144 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.307-201ENST00000365022 117 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 RNU6-102P-201ENST00000384485 104 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 MIR499A-201ENST00000384903 122 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 HSPE1P25-201ENST00000455484 251 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 HMGN2P9-201ENST00000476875 229 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 DEFB108E-201ENST00000524692 240 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 AC021269.2-201ENST00000532318 330 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 AC090616.3-201ENST00000582184 217 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 AP001282.2-201ENST00000616149 309 ntBASIC2.97□□□□□ -1.93
SMC1BQ8NDV3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 SNORD56.5-201ENST00000364281 72 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 RNA5SP125-201ENST00000364843 120 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 HMGN2P35-201ENST00000412164 270 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 MTND4LP30-201ENST00000454092 297 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 ATP5EP1-201ENST00000510257 156 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 RNU6-295P-201ENST00000516901 104 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 RNA5SP490-201ENST00000517141 136 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 AC055872.1-201ENST00000570978 278 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 MIR1248-201ENST00000629190 106 ntBASIC2.96□□□□□ -1.94
SMC1BQ8NDV3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 RNU6-743P-201ENST00000364151 106 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.446-201ENST00000384178 104 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 MIR518E-201ENST00000385252 88 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 SNORA26.9-201ENST00000391322 122 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 MIR548H3-201ENST00000408771 118 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 RNU2-54P-201ENST00000410299 190 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 POLR2KP2-201ENST00000438155 177 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 AC104389.3-201ENST00000445629 235 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 HMGB3P17-201ENST00000504195 649 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 RNU6-155P-201ENST00000516347 100 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 MIR3605-201ENST00000583214 100 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 AL590240.4-201ENST00000616908 390 ntBASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.95□□□□□ -1.94
SMC1BQ8NDV3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 RNU1-17P-201ENST00000363022 152 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.447-201ENST00000384184 113 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 MIR548B-201ENST00000385247 97 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
SMC1BQ8NDV3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms