Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RNU6-239P-201ENST00000390990 99 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 EBAG9P1-201ENST00000418955 543 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 AC097463.2-201ENST00000421074 142 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 SNORA31.1-201ENST00000515993 133 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 SNORA31.5-201ENST00000516190 133 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 IGKV3-31-201ENST00000523109 329 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 MIR3684-201ENST00000579779 74 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 MIR4744-201ENST00000581563 82 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 MIR4635-201ENST00000583759 79 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 Y_RNA.778-201ENST00000620203 90 ntBASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00116Q8NCU8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 RNU6-103P-201ENST00000363686 107 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 snoU2_19.4-201ENST00000364329 80 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 Y_RNA.368-201ENST00000365547 113 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 RNU6-417P-201ENST00000384712 107 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 MIR767-201ENST00000390228 109 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 RNU6-578P-201ENST00000390980 103 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 MIR1289-2-201ENST00000408360 111 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 RPS29P6-201ENST00000438196 145 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 AL049830.2-201ENST00000480072 201 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 RNU6-62P-201ENST00000516526 102 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 RNU6-1231P-201ENST00000517185 103 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 Y_RNA.802-201ENST00000614892 130 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 AC108206.1-201ENST00000570186 4159 ntBASIC3.3□□□□□ -1.88
LINC00116Q8NCU8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 Y_RNA.456-201ENST00000384232 111 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 RNU6-959P-201ENST00000384671 107 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 Y_RNA.572-201ENST00000384757 98 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 RNU2-51P-201ENST00000410708 197 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 SNRPGP3-201ENST00000469405 227 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 MIR4648-201ENST00000580107 72 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 RPL17P51-201ENST00000605218 238 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 U4.3-201ENST00000621047 82 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 AC008873.1-201ENST00000625051 138 ntBASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC00116Q8NCU8 AP001486.2-201ENST00000561652 5113 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 RNU1-105P-201ENST00000363470 161 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 Y_RNA.310-201ENST00000365063 113 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 RNU6-22P-201ENST00000384355 107 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 AL355497.1-201ENST00000406262 551 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 EIF4EP4-201ENST00000424916 578 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 snoU13.23-201ENST00000458863 104 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 RNU7-141P-201ENST00000459304 62 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 SNORA70.12-201ENST00000516084 153 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 RNA5SP272-201ENST00000516095 111 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 RNU6-426P-201ENST00000516464 97 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 RNU5F-4P-201ENST00000516581 114 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 MIR4431-201ENST00000579990 94 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 RPL30P11-203ENST00000598995 310 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 AC090517.3-201ENST00000625170 141 ntBASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
LINC00116Q8NCU8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 RNU6-1205P-201ENST00000363625 106 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 RNU6-969P-201ENST00000383900 105 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 MIR586-201ENST00000385035 97 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 RNA5SP354-201ENST00000391247 136 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 RNA5SP425-201ENST00000410336 112 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 RNU6-1007P-201ENST00000516586 107 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 RNU6-1098P-201ENST00000516772 96 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 AC090616.3-201ENST00000582184 217 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 MIR3605-201ENST00000583214 100 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LINC00116Q8NCU8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC00116Q8NCU8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LINC00116Q8NCU8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.26□□□□□ -1.89
LINC00116Q8NCU8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms