Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 Y_RNA.88-201ENST00000363029 99 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 Y_RNA.279-201ENST00000364763 95 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 MIR9-3-201ENST00000385084 90 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 AC007677.1-201ENST00000445757 515 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 RPL17P19-201ENST00000489069 552 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 AC069439.1-201ENST00000494739 167 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 AC010469.2-201ENST00000496412 480 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 RNU7-28P-201ENST00000516759 62 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 RPL21P9-201ENST00000556149 474 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 MIR4672-201ENST00000583126 81 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 AL365434.2-201ENST00000607979 234 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 AC073544.1-201ENST00000600110 1595 ntBASIC1.12□□□□□ -2.23
LINC01561Q8N1V8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 RNU1-22P-201ENST00000363334 158 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 SNORA3.2-201ENST00000408221 125 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 ELOCP21-201ENST00000412558 336 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 AL135790.2-201ENST00000437701 267 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 MTND3P10-201ENST00000450967 341 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 Y_RNA.691-201ENST00000516611 103 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 AC110588.1-201ENST00000559699 137 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 MIR3664-201ENST00000579074 99 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 AC080078.3-201ENST00000605407 463 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 AC092794.1-201ENST00000612734 582 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 AC092794.2-201ENST00000620933 563 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 MIR6079-201ENST00000635807 62 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 IGHVIII-44-202ENST00000636235 289 ntBASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01561Q8N1V8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 SNORA20B-201ENST00000384220 132 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 Y_RNA.557-201ENST00000384680 107 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 MIR660-201ENST00000385235 97 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 FGF7P8-201ENST00000402994 292 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 RNU7-87P-201ENST00000459343 62 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 RPS29P11-201ENST00000496507 171 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 RNU7-30P-201ENST00000516835 62 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 RNU6-250P-201ENST00000516958 103 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 RNU7-172P-201ENST00000517125 64 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC023157.2-201ENST00000540596 141 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC018448.1-201ENST00000552843 316 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 MIR4648-201ENST00000580107 72 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AL513534.2-201ENST00000603836 250 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC073413.2-201ENST00000604332 360 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 MIR502-201ENST00000606349 86 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC005828.6-201ENST00000606610 232 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 MIR8065-201ENST00000620577 100 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 AC098679.4-201ENST00000624241 654 ntBASIC1.1□□□□□ -2.23
LINC01561Q8N1V8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 RNU6-845P-201ENST00000362578 103 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 SNORA27.1-201ENST00000362604 124 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 RNU6-879P-201ENST00000364328 108 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 RNU6-1310P-201ENST00000384153 107 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 Y_RNA.505-201ENST00000384489 102 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 MIR583-201ENST00000384846 75 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 SNORA75.4-201ENST00000391278 119 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 AL355796.1-201ENST00000406706 323 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 SNORA11-201ENST00000408789 128 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 RN7SKP101-201ENST00000411376 320 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 AL353997.1-201ENST00000432936 108 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 Y_RNA.635-201ENST00000459041 101 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 RNU6-1278P-201ENST00000516130 107 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 RNU6-341P-201ENST00000516973 96 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 MIR4435-1-201ENST00000582552 80 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.09□□□□□ -2.23
LINC01561Q8N1V8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
LINC01561Q8N1V8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 RNU6-874P-201ENST00000362390 105 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 Y_RNA.498-201ENST00000384460 102 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 MIR873-201ENST00000401120 77 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 RNA5SP508-201ENST00000411327 119 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 AC092423.1-201ENST00000430165 186 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 RPL7P42-201ENST00000481005 679 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 RPS29P21-201ENST00000496272 170 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 RNA5SP20-201ENST00000515976 84 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 MTND4LP26-201ENST00000518144 282 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 SUMO2P16-201ENST00000519475 264 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 AL358944.1-201ENST00000528537 144 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 AC084782.3-201ENST00000612282 578 ntBASIC1.08□□□□□ -2.24
LINC01561Q8N1V8 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms