Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 AC022616.8-201ENST00000533569 253 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 DEFB117-201ENST00000602356 141 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 AC141273.2-201ENST00000618989 130 ntBASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SFTPA1Q8IWL2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 AC138915.1-201ENST00000565427 1685 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 FAM35CP-201ENST00000554755 2470 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 RNU4-80P-201ENST00000363200 141 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 Y_RNA.269-201ENST00000364685 89 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-740P-201ENST00000364734 105 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 RNA5SP240-201ENST00000365355 128 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-438P-201ENST00000365561 103 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 Y_RNA.515-201ENST00000384535 112 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 MIR300-201ENST00000401138 83 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 RNU2-14P-201ENST00000411053 191 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 AC016717.1-201ENST00000448918 286 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 HMGN2P18-201ENST00000450680 270 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 RNU7-57P-201ENST00000459540 60 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 BX284668.6-201ENST00000606899 438 ntBASIC2.44□□□□□ -2.02
SFTPA1Q8IWL2 Y_RNA.136-201ENST00000363444 102 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 SNORD31B-201ENST00000364977 69 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 MIR627-201ENST00000384979 97 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 MIR95-201ENST00000385072 81 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 U3.40-201ENST00000408706 208 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-651P-201ENST00000411040 105 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 Z82209.1-201ENST00000422141 2135 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 AL445687.1-201ENST00000439946 251 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 SNORA48.11-201ENST00000517015 89 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 RNA5SP490-201ENST00000517141 136 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 PRELID2P1-201ENST00000552837 301 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 AL512605.2-201ENST00000592972 256 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 MIR7843-201ENST00000622274 79 ntBASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
SFTPA1Q8IWL2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 Y_RNA.117-201ENST00000363294 101 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-418P-201ENST00000384035 107 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-662P-201ENST00000384253 104 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 MIR1289-2-201ENST00000408360 111 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 MIR1185-2-201ENST00000408687 86 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 AC104389.3-201ENST00000445629 235 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 Z96811.1-201ENST00000445880 108 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 NDUFB4P10-201ENST00000452541 359 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-991P-201ENST00000516168 107 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-436P-201ENST00000516171 114 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 AC025754.2-201ENST00000606491 432 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 MIR1291-201ENST00000627649 87 ntBASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.42□□□□□ -2.02
SFTPA1Q8IWL2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 SNORD88.1-201ENST00000408684 91 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-57P-201ENST00000411348 103 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 AC003685.2-201ENST00000422795 395 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 AC114982.1-201ENST00000469402 321 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 RNU6-138P-201ENST00000515952 107 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 MIR4648-201ENST00000580107 72 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 U6.115-201ENST00000636045 103 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
SFTPA1Q8IWL2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
SFTPA1Q8IWL2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SFTPA1Q8IWL2 Y_RNA.76-201ENST00000362931 109 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 SNORD115-30-201ENST00000364117 82 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.275-201ENST00000364726 110 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-975P-201ENST00000384296 105 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AL031003.1-201ENST00000404229 172 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AL357139.1-201ENST00000407792 426 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AC104332.2-201ENST00000429959 156 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AC018634.1-201ENST00000437554 401 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 UBBP3-201ENST00000445497 241 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AC074290.1-201ENST00000448883 135 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 RNA5SP76-201ENST00000516277 87 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-191P-201ENST00000516295 94 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 SNORA27.4-201ENST00000516650 95 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AL162424.1-201ENST00000602325 221 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 AC005828.6-201ENST00000606610 232 ntBASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.4□□□□□ -2.03
SFTPA1Q8IWL2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms