Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR4513-201ENST00000581077 86 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 DNAJC19P2-201ENST00000593340 302 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AC004832.5-201ENST00000608677 401 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AC013412.1-201ENST00000610687 192 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AL078604.3-201ENST00000615580 211 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 AL391516.1-201ENST00000554380 2449 ntBASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS4Q8IUM7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 RNU6-899P-201ENST00000363947 107 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 SNORD116-14-201ENST00000383894 92 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 SNORD116-17-201ENST00000383929 92 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 SNORD116-15-201ENST00000384445 92 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.542-201ENST00000384641 111 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 SNORD116-19-201ENST00000384729 92 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 MIR626-201ENST00000385032 94 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 AC123900.1-201ENST00000420390 96 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 AL357134.1-201ENST00000445848 426 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 AC107027.2-201ENST00000512197 115 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 SCARNA8-201ENST00000515924 131 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 RNU6-919P-201ENST00000516731 104 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 RNU6-667P-201ENST00000517186 102 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 MIR4298-201ENST00000584380 73 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 AL035425.3-201ENST00000564206 4996 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
NPAS4Q8IUM7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 AL159152.1-201ENST00000635019 2587 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.24-201ENST00000362508 103 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 RNU6-1325P-201ENST00000364905 105 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 Y_RNA.500-201ENST00000384466 111 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 MIR873-201ENST00000401120 77 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 AC010598.1-201ENST00000510378 103 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 RNU6-991P-201ENST00000516168 107 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 AC006435.5-201ENST00000624486 112 ntBASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPAS4Q8IUM7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 RNU1-70P-201ENST00000362618 164 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 RNU6-103P-201ENST00000363686 107 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.287-201ENST00000364853 94 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 SNORD14D-201ENST00000384390 87 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 SNORA8.3-201ENST00000384679 139 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 AC104389.3-201ENST00000445629 235 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 AC093259.1-201ENST00000509755 300 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.686-201ENST00000516548 134 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 AC107934.2-201ENST00000518653 310 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 AC109810.1-201ENST00000534066 224 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 AC093732.2-201ENST00000607950 274 ntBASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPAS4Q8IUM7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 SNORA80A-201ENST00000363922 136 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.332-201ENST00000365271 113 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 SNORA25B-201ENST00000365507 128 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 RNU6-418P-201ENST00000384035 107 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 Y_RNA.420-201ENST00000384043 110 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 SNORA72.4-201ENST00000384174 132 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 RNU6-855P-201ENST00000410395 104 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 SRIP3-201ENST00000413200 219 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 AC016717.1-201ENST00000448918 286 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 UBE2DNL-203ENST00000474922 222 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 RNU6-1007P-201ENST00000516586 107 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 AC025754.2-201ENST00000606491 432 ntBASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPAS4Q8IUM7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 RNU6-199P-201ENST00000362954 107 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 RNU6-153P-201ENST00000364422 104 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 RNU6-1240P-201ENST00000365155 104 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 SNORA44-201ENST00000384584 132 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 RNU1-89P-201ENST00000384592 164 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 AC006461.1-201ENST00000412637 326 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 AC245102.2-201ENST00000448956 180 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 AC245047.8-201ENST00000456455 284 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 RPS4XP2-201ENST00000458402 793 ntBASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.5□□□□□ -1.85
NPAS4Q8IUM7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms