Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-1020P-201ENST00000363684 107 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 RNU6-461P-201ENST00000364195 107 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 RNU6-454P-201ENST00000364292 107 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 RNU6-546P-201ENST00000383991 107 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 MIR548B-201ENST00000385247 97 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
USP48Q86UV5 BMS1P22-201ENST00000414726 313 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.48□□□□□ -1.85
USP48Q86UV5 SNORA48.11-201ENST00000517015 89 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 AL356280.1-201ENST00000603614 379 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 AC005828.6-201ENST00000606610 232 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 AL590808.1-201ENST00000618696 141 ntBASIC3.48□□□□□ -1.85
USP48Q86UV5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP48Q86UV5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.48□□□□□ -1.85
USP48Q86UV5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
USP48Q86UV5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
USP48Q86UV5 Y_RNA.233-201ENST00000364407 101 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 RNU6-220P-201ENST00000390919 107 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 RN7SKP123-201ENST00000410732 291 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 RNU2-32P-201ENST00000411193 191 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.47□□□□□ -1.85
USP48Q86UV5 Y_RNA.679-201ENST00000516416 91 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 AC022616.8-201ENST00000533569 253 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 MRPS18CP4-201ENST00000535821 231 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 AL449363.1-201ENST00000617815 186 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 U6.106-201ENST00000636360 105 ntBASIC3.47□□□□□ -1.85
USP48Q86UV5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
USP48Q86UV5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
USP48Q86UV5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
USP48Q86UV5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP48Q86UV5 Y_RNA.240-201ENST00000364469 95 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 RNU6-923P-201ENST00000364753 107 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 SNORD31B-201ENST00000364977 69 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 RNU6-394P-201ENST00000410735 107 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 AL513328.1-201ENST00000446460 224 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 ATP5EP1-201ENST00000510257 156 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 RNU6-191P-201ENST00000516295 94 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 RNU6-965P-201ENST00000516721 96 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 MTND5P41-201ENST00000517498 206 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP48Q86UV5 MIR3145-201ENST00000580727 82 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 MIR4506-201ENST00000584693 77 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.46□□□□□ -1.86
USP48Q86UV5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP48Q86UV5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
USP48Q86UV5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.45□□□□□ -1.86
USP48Q86UV5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.45□□□□□ -1.86
USP48Q86UV5 RNU6-324P-201ENST00000363957 106 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 SNORA9.2-201ENST00000365361 133 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 U3.40-201ENST00000408706 208 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 AL451074.5-201ENST00000415894 435 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 UBL5P3-201ENST00000475112 231 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 RNA5SP385-201ENST00000515947 110 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 RNU6-346P-201ENST00000516288 111 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.45□□□□□ -1.86
USP48Q86UV5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.45□□□□□ -1.86
USP48Q86UV5 MIR4769-201ENST00000584126 77 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 AC073349.3-201ENST00000617616 186 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 snoU18.1-201ENST00000629629 71 ntBASIC3.45□□□□□ -1.86
USP48Q86UV5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP48Q86UV5 MAPK10-266ENST00000641066 6555 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 RNU4-80P-201ENST00000363200 141 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 SNORD113-1-201ENST00000365321 69 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 RNU6-804P-201ENST00000384286 107 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 RNU6-1248P-201ENST00000391096 64 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 AL357139.1-201ENST00000407792 426 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 AC024067.1-201ENST00000426199 223 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.44□□□□□ -1.86
USP48Q86UV5 RNU6-1219P-201ENST00000516143 112 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 RNA5SP76-201ENST00000516277 87 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.44□□□□□ -1.86
USP48Q86UV5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.44□□□□□ -1.86
USP48Q86UV5 MIR4524B-201ENST00000581569 115 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 MIR3117-201ENST00000584034 78 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 DEFB117-201ENST00000602356 141 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 AL355297.2-201ENST00000604792 129 ntBASIC3.44□□□□□ -1.86
USP48Q86UV5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP48Q86UV5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
USP48Q86UV5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
USP48Q86UV5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.43□□□□□ -1.86
USP48Q86UV5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.43□□□□□ -1.86
USP48Q86UV5 RNU6-653P-201ENST00000363074 106 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 Y_RNA.308-201ENST00000365043 101 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 Y_RNA.329-201ENST00000365209 107 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 RNU6-438P-201ENST00000365561 103 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 AL590004.2-201ENST00000404787 371 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 MIR1185-2-201ENST00000408687 86 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 RNU6-1135P-201ENST00000411083 103 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 AC104332.2-201ENST00000429959 156 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 Z96811.1-201ENST00000445880 108 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 snoU13.26-201ENST00000459452 105 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 RN7SKP282-201ENST00000516824 299 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 MIR3684-201ENST00000579779 74 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 AC004832.5-201ENST00000608677 401 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 MIR1248-201ENST00000629190 106 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.43□□□□□ -1.86
USP48Q86UV5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms