Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC62Q6P9F0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC62Q6P9F0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC62Q6P9F0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC62Q6P9F0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 UBE2WP1-201ENST00000362030 340 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 RNU6-461P-201ENST00000364195 107 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 SNORD87-201ENST00000364849 89 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 SNORA72.2-201ENST00000365028 127 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 RNU6-125P-201ENST00000384505 107 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 MIR586-201ENST00000385035 97 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 AL590004.2-201ENST00000404787 371 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 HMGN2P35-201ENST00000412164 270 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 RPL23AP36-201ENST00000413895 458 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 SNORA27.4-201ENST00000516650 95 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 RNU1-117P-201ENST00000517041 158 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 AC006001.4-201ENST00000622243 395 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC62Q6P9F0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.136-201ENST00000363444 102 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 U3.8-201ENST00000363675 217 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 RNU6-234P-201ENST00000365229 104 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.506-201ENST00000384494 102 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 AL161788.1-201ENST00000441805 169 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 AC005042.3-201ENST00000453230 174 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 CYP2C59P-201ENST00000457790 269 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.638-201ENST00000459374 113 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.703-201ENST00000516846 111 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 MIR4635-201ENST00000583759 79 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 AC004467.1-201ENST00000615678 330 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 AL590808.1-201ENST00000618696 141 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 AC091932.3-201ENST00000624223 323 ntBASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC62Q6P9F0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 Y_RNA.101-201ENST00000363154 102 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 RNU6-220P-201ENST00000390919 107 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 OOSP1P1-201ENST00000423265 274 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 TOMM22P2-201ENST00000430735 237 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 POLR2KP2-201ENST00000438155 177 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 MIR449C-201ENST00000516047 92 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 RNU1-41P-201ENST00000516161 162 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 RNA5SP320-201ENST00000516263 124 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 RNU1-48P-201ENST00000516400 162 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 RNU6-826P-201ENST00000516827 104 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 SNORA48.11-201ENST00000517015 89 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 AL356280.1-201ENST00000603614 379 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 AC072026.1-201ENST00000605023 201 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC62Q6P9F0 RNA5SP240-201ENST00000365355 128 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 MIR518C-201ENST00000384822 101 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 MIR300-201ENST00000401138 83 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 AL139095.1-201ENST00000404326 391 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 RNU2-54P-201ENST00000410299 190 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 RNA5SP475-201ENST00000410568 110 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 RN7SKP51-201ENST00000410781 304 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 RNA5SP508-201ENST00000411327 119 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 SNORD2.1-201ENST00000458762 69 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 RNU6-966P-201ENST00000516479 104 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 RNU6-107P-201ENST00000516643 102 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 CTSLP2-204ENST00000629029 392 ntBASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC62Q6P9F0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.9□□□□□ -1.94
CCDC62Q6P9F0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.94
CCDC62Q6P9F0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CCDC62Q6P9F0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC62Q6P9F0 RNU6-918P-201ENST00000391219 106 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 516.6 ms