Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 CYCSP23-201ENST00000519781 313 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 GNAI2P1-201ENST00000541815 315 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 AC093023.1-201ENST00000547375 507 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 RRN3P3-201ENST00000549207 578 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 AL442163.3-201ENST00000554110 156 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 MIR5695-201ENST00000579717 85 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 AC010999.1-201ENST00000611856 324 ntBASIC1.49□□□□□ -2.17
ZNF544Q6NX49 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.49□□□□□ -2.17
ZNF544Q6NX49 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.48□□□□□ -2.17
ZNF544Q6NX49 MIR369-201ENST00000362155 70 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 RNU6-1301P-201ENST00000362724 104 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.128-201ENST00000363391 112 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.179-201ENST00000363844 90 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 RNU6-474P-201ENST00000384243 107 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 RNY3P4-201ENST00000384428 101 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 RNU6-1026P-201ENST00000384465 108 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 SNORA8-201ENST00000384574 139 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 RNU6-1001P-201ENST00000411265 100 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AL354751.2-201ENST00000415471 210 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 MTCYBP6-201ENST00000441810 138 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AC010531.2-201ENST00000465012 153 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AC067942.3-201ENST00000512025 362 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 SNORA40.14-201ENST00000516543 86 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 RNU4-77P-201ENST00000516692 156 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AK6P2-201ENST00000549020 471 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.48□□□□□ -2.17
ZNF544Q6NX49 VN1R91P-201ENST00000594377 169 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AL031274.2-201ENST00000599419 203 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AL138825.1-201ENST00000618587 192 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 U2.1-201ENST00000618978 145 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 AL606534.2-204ENST00000635008 178 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.48□□□□□ -2.17
ZNF544Q6NX49 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ZNF544Q6NX49 MTND5P35-201ENST00000557537 1720 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 MIR410-201ENST00000362222 80 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 RNU6-545P-201ENST00000362681 104 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 U3.8-201ENST00000363675 217 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 RNU6-743P-201ENST00000364151 106 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.314-201ENST00000365114 102 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 RNU6-975P-201ENST00000384296 105 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 RNY1P14-201ENST00000384426 108 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 MIR1283-2-201ENST00000408621 87 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 AC114482.1-201ENST00000418010 247 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 PMCHL1-202ENST00000423102 261 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 RNU7-87P-201ENST00000459343 62 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.631-201ENST00000459607 101 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 AC074133.1-201ENST00000515696 183 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 Y_RNA.701-201ENST00000516812 110 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 MZT1P2-201ENST00000604387 248 ntBASIC1.47□□□□□ -2.17
ZNF544Q6NX49 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.47□□□□□ -2.17
ZNF544Q6NX49 RNA5SP361-201ENST00000362686 118 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.138-201ENST00000363462 102 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 RNU6-438P-201ENST00000365561 103 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.445-201ENST00000384168 102 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 RNU6-1235P-201ENST00000384559 107 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 RNU6-160P-201ENST00000384591 107 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 MIR518A2-201ENST00000384966 87 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 MCFD2P1-201ENST00000417812 300 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AL445305.1-201ENST00000432577 575 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 RNU6-498P-201ENST00000459468 107 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AC114982.1-201ENST00000469402 321 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 RNU6-856P-201ENST00000516959 98 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AC022868.1-201ENST00000517767 391 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AC023442.1-201ENST00000531247 422 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AC020661.2-201ENST00000560114 134 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.46□□□□□ -2.18
ZNF544Q6NX49 MIR4753-201ENST00000585119 83 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AC044792.1-201ENST00000593294 196 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 AC092447.9-201ENST00000603395 144 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 SNORD58B-201ENST00000607313 66 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 MIR8081-201ENST00000611533 95 ntBASIC1.46□□□□□ -2.18
ZNF544Q6NX49 RNU1-58P-201ENST00000362413 163 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.27-201ENST00000362540 103 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.28-201ENST00000362554 111 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.39-201ENST00000362620 98 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.80-201ENST00000362996 102 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 SNORD114-6-201ENST00000364393 72 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 RNU6-1227P-201ENST00000383981 107 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 Y_RNA.415-201ENST00000384012 112 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 RNA5SP465-201ENST00000391195 109 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 RNA5SP212-201ENST00000391223 107 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 MIR934-201ENST00000401241 83 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 MIR548P-201ENST00000408336 84 ntBASIC1.45□□□□□ -2.18
ZNF544Q6NX49 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms