Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 Y_RNA.446-201ENST00000384178 104 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 RNU6-793P-201ENST00000384233 104 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.555-201ENST00000384673 110 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 SNORA53-201ENST00000391141 249 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 MIR320B2-201ENST00000408479 138 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 AC009237.7-201ENST00000447357 229 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 RPS29P21-201ENST00000496272 170 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 AC018630.3-201ENST00000542637 96 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 AK6P2-201ENST00000549020 471 ntBASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.7□□□□□ -1.98
SLC44A4Q53GD3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNA5SP289-201ENST00000362332 137 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.270-201ENST00000364693 104 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 SNORD87-201ENST00000364849 89 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNU6-234P-201ENST00000365229 104 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNA5SP240-201ENST00000365355 128 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNU6-326P-201ENST00000365480 107 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNA5SP504-201ENST00000410676 117 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNU4-53P-201ENST00000410828 140 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RN7SKP192-201ENST00000411291 327 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 IFNA11P-201ENST00000446352 526 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 AL138752.1-201ENST00000452964 351 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNU7-26P-201ENST00000458980 63 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.644-201ENST00000459006 113 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 AC107393.1-201ENST00000512403 346 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNA5SP282-201ENST00000516355 108 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.674-201ENST00000516362 113 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 RNU6-966P-201ENST00000516479 104 ntBASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SLC44A4Q53GD3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 RNU6-545P-201ENST00000362681 104 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.331-201ENST00000365267 102 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 MIR548M-201ENST00000408260 86 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 RNU2-48P-201ENST00000410694 191 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 MRPS10P1-201ENST00000448483 130 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 RNU7-14P-201ENST00000459331 62 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 AC018868.1-201ENST00000491307 315 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 SNORD116-28-201ENST00000516123 91 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 AC024405.2-202ENST00000532731 184 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 AC022616.8-201ENST00000533569 253 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 RPL21P9-201ENST00000556149 474 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 U4.3-201ENST00000621047 82 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 AC006001.4-201ENST00000622243 395 ntBASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A4Q53GD3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 MIR411-201ENST00000362239 96 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RNU1-62P-201ENST00000362599 164 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RNU6-774P-201ENST00000363238 107 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.292-201ENST00000364904 97 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RNU6-886P-201ENST00000384319 105 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RNA5SP425-201ENST00000410336 112 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 Y_RNA.626-201ENST00000411288 95 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 UQCRBP2-201ENST00000447827 297 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 SNORA31.11-201ENST00000516528 139 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 PRELID2P1-201ENST00000552837 301 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 AC005176.2-201ENST00000596933 147 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 AL162424.1-201ENST00000602325 221 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 SNORD11B-201ENST00000607707 90 ntBASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SLC44A4Q53GD3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 SNORA25.1-201ENST00000362326 128 ntBASIC2.66□□□□□ -1.98
SLC44A4Q53GD3 RNY4P28-201ENST00000365281 93 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms