Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
NCBP3Q53F19 Y_RNA.140-201ENST00000363474 103 ntBASIC6.11□□□□□ -1.43
NCBP3Q53F19 Z74021.1-201ENST00000423610 407 ntBASIC6.11□□□□□ -1.43
NCBP3Q53F19 RNA5SP446-201ENST00000515955 82 ntBASIC6.11□□□□□ -1.43
NCBP3Q53F19 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.11□□□□□ -1.43
NCBP3Q53F19 AC140113.4-201ENST00000622087 222 ntBASIC6.11□□□□□ -1.43
NCBP3Q53F19 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCBP3Q53F19 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NCBP3Q53F19 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NCBP3Q53F19 AC245060.5-201ENST00000610778 3293 ntBASIC6.1□□□□□ -1.43
NCBP3Q53F19 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCBP3Q53F19 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCBP3Q53F19 MIR519C-201ENST00000385053 87 ntBASIC6.1□□□□□ -1.43
NCBP3Q53F19 RNU7-34P-201ENST00000459394 64 ntBASIC6.1□□□□□ -1.43
NCBP3Q53F19 RPPH1-2P-201ENST00000516688 293 ntBASIC6.1□□□□□ -1.43
NCBP3Q53F19 RNU7-181P-201ENST00000517234 74 ntBASIC6.1□□□□□ -1.43
NCBP3Q53F19 UCA1.1-201ENST00000620952 75 ntBASIC6.1□□□□□ -1.43
NCBP3Q53F19 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.1□□□□□ -1.43
NCBP3Q53F19 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NCBP3Q53F19 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NCBP3Q53F19 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.1□□□□□ -1.43
NCBP3Q53F19 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NCBP3Q53F19 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NCBP3Q53F19 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NCBP3Q53F19 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NCBP3Q53F19 RNU6-163P-201ENST00000384396 106 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 FO393413.1-201ENST00000402892 195 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 AC016397.1-201ENST00000412463 242 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 IGLV2-34-201ENST00000490007 283 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 AL592156.1-201ENST00000508758 304 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 IGLV3-17-201ENST00000519099 244 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 AC024995.1-201ENST00000523014 93 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 AC069240.1-201ENST00000548774 375 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 MIR4330-201ENST00000579077 105 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 5S_rRNA.12-201ENST00000617631 107 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 SEPT14P17-201ENST00000617978 177 ntBASIC6.09□□□□□ -1.43
NCBP3Q53F19 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NCBP3Q53F19 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC6.09□□□□□ -1.43
NCBP3Q53F19 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NCBP3Q53F19 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NCBP3Q53F19 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.08□□□□□ -1.44
NCBP3Q53F19 RNA5SP387-201ENST00000364226 106 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 RNU6-590P-201ENST00000365039 107 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 U8.11-201ENST00000384699 133 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 MIR515-2-201ENST00000384883 83 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 MIR515-1-201ENST00000384884 83 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 MIR1267-201ENST00000408723 78 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 CYCSP19-201ENST00000411715 316 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 RPL31P63-201ENST00000422565 375 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 AL161932.1-201ENST00000437408 146 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 U8.18-201ENST00000459285 133 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.08□□□□□ -1.44
NCBP3Q53F19 RNU6-1116P-201ENST00000517269 99 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 AC134698.5-201ENST00000519444 336 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 FAS-AS1.1-201ENST00000615327 126 ntBASIC6.08□□□□□ -1.44
NCBP3Q53F19 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NCBP3Q53F19 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.08□□□□□ -1.44
NCBP3Q53F19 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
NCBP3Q53F19 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC6.08□□□□□ -1.44
NCBP3Q53F19 AL022322.2-201ENST00000624072 20397 ntBASIC6.07□□□□□ -1.44
NCBP3Q53F19 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.07□□□□□ -1.44
NCBP3Q53F19 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NCBP3Q53F19 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NCBP3Q53F19 RNU6-424P-201ENST00000384367 105 ntBASIC6.07□□□□□ -1.44
NCBP3Q53F19 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.07□□□□□ -1.44
NCBP3Q53F19 MIR298-201ENST00000401212 88 ntBASIC6.07□□□□□ -1.44
NCBP3Q53F19 RN7SL52P-201ENST00000584271 284 ntBASIC6.07□□□□□ -1.44
NCBP3Q53F19 RN7SL722P-201ENST00000617780 284 ntBASIC6.07□□□□□ -1.44
NCBP3Q53F19 RN7SL565P-201ENST00000618246 284 ntBASIC6.07□□□□□ -1.44
NCBP3Q53F19 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
NCBP3Q53F19 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC6.07□□□□□ -1.44
NCBP3Q53F19 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.06□□□□□ -1.44
NCBP3Q53F19 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NCBP3Q53F19 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NCBP3Q53F19 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NCBP3Q53F19 SNORD38.1-201ENST00000363863 68 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 RNA5SP513-201ENST00000364648 118 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 RNU6ATAC10P-201ENST00000408635 111 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 RNU2-63P-201ENST00000410792 194 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 RN7SKP192-201ENST00000411291 327 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.06□□□□□ -1.44
NCBP3Q53F19 ATP5J2P3-201ENST00000451550 258 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 AC090255.1-201ENST00000495779 349 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC6.06□□□□□ -1.44
NCBP3Q53F19 MIR3199-1-201ENST00000582434 88 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 AL356218.2-201ENST00000605264 187 ntBASIC6.06□□□□□ -1.44
NCBP3Q53F19 CPHL1P-201ENST00000461341 3407 ntBASIC6.05□□□□□ -1.44
NCBP3Q53F19 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC6.05□□□□□ -1.44
NCBP3Q53F19 AC021146.4-201ENST00000309229 279 ntBASIC6.05□□□□□ -1.44
NCBP3Q53F19 SNORD115-37-201ENST00000363768 82 ntBASIC6.05□□□□□ -1.44
NCBP3Q53F19 SNORA70.2-201ENST00000364506 135 ntBASIC6.05□□□□□ -1.44
NCBP3Q53F19 RNU2-48P-201ENST00000410694 191 ntBASIC6.05□□□□□ -1.44
NCBP3Q53F19 RNU6-1328P-201ENST00000410938 106 ntBASIC6.05□□□□□ -1.44
NCBP3Q53F19 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC6.05□□□□□ -1.44
NCBP3Q53F19 SCARNA11.3-201ENST00000517276 130 ntBASIC6.05□□□□□ -1.44
NCBP3Q53F19 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NCBP3Q53F19 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NCBP3Q53F19 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NCBP3Q53F19 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NCBP3Q53F19 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms