Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 SNORD65B-201ENST00000459126 73 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 RNU7-141P-201ENST00000459304 62 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.64□□□□□ -1.83
ECM1Q16610 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.64□□□□□ -1.83
ECM1Q16610 LARP7P3-201ENST00000579888 337 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 AC013412.1-201ENST00000610687 192 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 AC096577.2-201ENST00000611455 153 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 MIR3914-2-201ENST00000637339 95 ntBASIC3.64□□□□□ -1.83
ECM1Q16610 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ECM1Q16610 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.64□□□□□ -1.83
ECM1Q16610 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
ECM1Q16610 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
ECM1Q16610 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ECM1Q16610 RNU1-72P-201ENST00000362976 153 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 RNU6-460P-201ENST00000391158 108 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.63□□□□□ -1.83
ECM1Q16610 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
ECM1Q16610 RNA5SP20-201ENST00000515976 84 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 AL161756.2-201ENST00000604597 246 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 AC005972.2-201ENST00000604690 348 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 AC099778.2-201ENST00000610904 211 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 AC134026.1-201ENST00000623249 2239 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
ECM1Q16610 AP006437.1-201ENST00000641440 3685 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ECM1Q16610 Y_RNA.116-201ENST00000363292 103 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 RNY1P11-201ENST00000363759 113 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 snoU2_19.4-201ENST00000364329 80 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 Y_RNA.337-201ENST00000365312 102 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 Y_RNA.388-201ENST00000383919 113 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 SNORA12.1-201ENST00000390873 148 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 RNU6-1328P-201ENST00000410938 106 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.62□□□□□ -1.83
ECM1Q16610 AC090515.1-201ENST00000465295 476 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 RPS26P55-201ENST00000471178 356 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 RPS29P21-201ENST00000496272 170 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 ATP5EP1-201ENST00000510257 156 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 RNU6-1146P-201ENST00000516282 102 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 AC104027.1-201ENST00000521887 300 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
ECM1Q16610 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.62□□□□□ -1.83
ECM1Q16610 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ECM1Q16610 AC068647.2-201ENST00000637380 353 ntBASIC3.62□□□□□ -1.83
ECM1Q16610 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ECM1Q16610 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ECM1Q16610 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
ECM1Q16610 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ECM1Q16610 AC068700.1-201ENST00000565862 3754 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ECM1Q16610 RNU6-199P-201ENST00000362954 107 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 RNU4-13P-201ENST00000364019 141 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 Y_RNA.251-201ENST00000364551 99 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 RNU6-1323P-201ENST00000384025 107 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 SNORA40.5-201ENST00000391061 128 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 AL355796.1-201ENST00000406706 323 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 MIR1253-201ENST00000408273 105 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 RPL23AP83-201ENST00000434984 473 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 CST9LP2-201ENST00000437612 320 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 HMGN1P18-201ENST00000457642 277 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 RNU1-143P-201ENST00000516296 146 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 RNU6-1337P-201ENST00000516525 95 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 RNU6-965P-201ENST00000516721 96 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 AC025647.1-201ENST00000517879 253 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 MTND5P34-201ENST00000568888 325 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 YPEL5P2-201ENST00000605553 359 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 U7.2-201ENST00000607576 63 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 U1.23-201ENST00000610293 146 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 RNU1-68P-201ENST00000615382 146 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 MIR548AY-201ENST00000617669 107 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 U1.39-201ENST00000621562 146 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 AC073476.4-201ENST00000628409 72 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 AC073346.2-201ENST00000624724 2058 ntBASIC3.61□□□□□ -1.83
ECM1Q16610 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.61□□□□□ -1.83
ECM1Q16610 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
ECM1Q16610 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
ECM1Q16610 AC092435.3-201ENST00000565538 3654 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 CENPCP1-201ENST00000533085 2578 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECM1Q16610 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ECM1Q16610 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECM1Q16610 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.6□□□□□ -1.83
ECM1Q16610 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECM1Q16610 RNU6-418P-201ENST00000384035 107 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 Y_RNA.495-201ENST00000384435 112 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 MIR616-201ENST00000385293 97 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 RNU6-1275P-201ENST00000391087 107 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 AC123900.1-201ENST00000420390 96 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 AL159169.1-201ENST00000421119 127 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 AC016717.1-201ENST00000448918 286 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 BX510359.1-201ENST00000456973 237 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 RNU6-1231P-201ENST00000517185 103 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 AL391903.3-201ENST00000612158 163 ntBASIC3.6□□□□□ -1.83
ECM1Q16610 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
ECM1Q16610 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
ECM1Q16610 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECM1Q16610 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECM1Q16610 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECM1Q16610 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms