Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.57□□□□□ -2.16
SRPXP78539 AC134503.1-201ENST00000633048 54 ntBASIC1.57□□□□□ -2.16
SRPXP78539 MIR338-201ENST00000636369 67 ntBASIC1.57□□□□□ -2.16
SRPXP78539 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.57□□□□□ -2.16
SRPXP78539 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SRPXP78539 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SRPXP78539 Y_RNA.28-201ENST00000362554 111 ntBASIC1.56□□□□□ -2.16
SRPXP78539 snoU2-30.2-201ENST00000362805 70 ntBASIC1.56□□□□□ -2.16
SRPXP78539 Y_RNA.128-201ENST00000363391 112 ntBASIC1.56□□□□□ -2.16
SRPXP78539 RNU1-96P-201ENST00000364163 162 ntBASIC1.56□□□□□ -2.16
SRPXP78539 RNU6-450P-201ENST00000364654 107 ntBASIC1.56□□□□□ -2.16
SRPXP78539 Y_RNA.645-201ENST00000391229 102 ntBASIC1.56□□□□□ -2.16
SRPXP78539 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.56□□□□□ -2.16
SRPXP78539 TOMM22P2-201ENST00000430735 237 ntBASIC1.56□□□□□ -2.16
SRPXP78539 FCF1P4-201ENST00000448326 183 ntBASIC1.56□□□□□ -2.16
SRPXP78539 RPL23AP3-201ENST00000453844 468 ntBASIC1.56□□□□□ -2.16
SRPXP78539 AC112492.4-201ENST00000456549 352 ntBASIC1.56□□□□□ -2.16
SRPXP78539 Y_RNA.711-201ENST00000516993 102 ntBASIC1.56□□□□□ -2.16
SRPXP78539 CYCSP23-201ENST00000519781 313 ntBASIC1.56□□□□□ -2.16
SRPXP78539 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SRPXP78539 AC023442.1-201ENST00000531247 422 ntBASIC1.56□□□□□ -2.16
SRPXP78539 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.56□□□□□ -2.16
SRPXP78539 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.56□□□□□ -2.16
SRPXP78539 MIR4287-201ENST00000579398 78 ntBASIC1.56□□□□□ -2.16
SRPXP78539 AL627230.6-201ENST00000611129 280 ntBASIC1.56□□□□□ -2.16
SRPXP78539 AC240442.1-201ENST00000616055 283 ntBASIC1.56□□□□□ -2.16
SRPXP78539 SCARNA15.3-201ENST00000626315 122 ntBASIC1.56□□□□□ -2.16
SRPXP78539 SCARNA4.1-201ENST00000628597 123 ntBASIC1.56□□□□□ -2.16
SRPXP78539 MTND5P6-201ENST00000422338 1798 ntBASIC1.56□□□□□ -2.16
SRPXP78539 AL136360.1-201ENST00000503377 1900 ntBASIC1.56□□□□□ -2.16
SRPXP78539 ZNF355P-201ENST00000427301 3216 ntBASIC1.55□□□□□ -2.16
SRPXP78539 AC005592.1-201ENST00000566527 1640 ntBASIC1.55□□□□□ -2.16
SRPXP78539 Y_RNA.11-201ENST00000362375 109 ntBASIC1.55□□□□□ -2.16
SRPXP78539 RNU6-1240P-201ENST00000365155 104 ntBASIC1.55□□□□□ -2.16
SRPXP78539 MIR676-201ENST00000390702 67 ntBASIC1.55□□□□□ -2.16
SRPXP78539 RNA5SP467-201ENST00000391274 118 ntBASIC1.55□□□□□ -2.16
SRPXP78539 RNU4-53P-201ENST00000410828 140 ntBASIC1.55□□□□□ -2.16
SRPXP78539 MTCO3P19-201ENST00000415864 321 ntBASIC1.55□□□□□ -2.16
SRPXP78539 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.55□□□□□ -2.16
SRPXP78539 AL163540.1-201ENST00000485382 386 ntBASIC1.55□□□□□ -2.16
SRPXP78539 MRPS17P9-201ENST00000511924 393 ntBASIC1.55□□□□□ -2.16
SRPXP78539 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.55□□□□□ -2.16
SRPXP78539 RNU6-966P-201ENST00000516479 104 ntBASIC1.55□□□□□ -2.16
SRPXP78539 SNORA40.14-201ENST00000516543 86 ntBASIC1.55□□□□□ -2.16
SRPXP78539 AC040926.1-201ENST00000530195 238 ntBASIC1.55□□□□□ -2.16
SRPXP78539 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.55□□□□□ -2.16
SRPXP78539 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.55□□□□□ -2.16
SRPXP78539 MIR4672-201ENST00000583126 81 ntBASIC1.55□□□□□ -2.16
SRPXP78539 Y_RNA.783-201ENST00000613546 102 ntBASIC1.55□□□□□ -2.16
SRPXP78539 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.55□□□□□ -2.16
SRPXP78539 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.55□□□□□ -2.16
SRPXP78539 MIR3674-201ENST00000636576 68 ntBASIC1.55□□□□□ -2.16
SRPXP78539 AP006437.1-201ENST00000641440 3685 ntBASIC1.55□□□□□ -2.16
SRPXP78539 RNU6-694P-201ENST00000364071 147 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AL512604.1-201ENST00000404812 257 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AL355796.1-201ENST00000406706 323 ntBASIC1.54□□□□□ -2.16
SRPXP78539 MIR1253-201ENST00000408273 105 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AL135786.1-201ENST00000415892 214 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
SRPXP78539 SDAD1P3-201ENST00000427380 333 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AC245047.4-201ENST00000433189 144 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.54□□□□□ -2.16
SRPXP78539 MTCYBP6-201ENST00000441810 138 ntBASIC1.54□□□□□ -2.16
SRPXP78539 SNORD65B-201ENST00000459126 73 ntBASIC1.54□□□□□ -2.16
SRPXP78539 RNA5SP57-201ENST00000459463 123 ntBASIC1.54□□□□□ -2.16
SRPXP78539 SNORA25.10-201ENST00000515926 124 ntBASIC1.54□□□□□ -2.16
SRPXP78539 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SRPXP78539 SUB1P4-201ENST00000566062 339 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AC044792.1-201ENST00000593294 196 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AC078899.2-201ENST00000595282 212 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AL356055.1-201ENST00000602528 446 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AL353149.1-201ENST00000610667 244 ntBASIC1.54□□□□□ -2.16
SRPXP78539 AC004467.1-201ENST00000615678 330 ntBASIC1.54□□□□□ -2.16
SRPXP78539 MIR219B-201ENST00000637023 88 ntBASIC1.54□□□□□ -2.16
SRPXP78539 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
SRPXP78539 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
SRPXP78539 MIR410-201ENST00000362222 80 ntBASIC1.53□□□□□ -2.16
SRPXP78539 RNA5SP289-201ENST00000362332 137 ntBASIC1.53□□□□□ -2.16
SRPXP78539 Y_RNA.101-201ENST00000363154 102 ntBASIC1.53□□□□□ -2.16
SRPXP78539 RNU6-20P-201ENST00000384106 107 ntBASIC1.53□□□□□ -2.16
SRPXP78539 Y_RNA.458-201ENST00000384240 102 ntBASIC1.53□□□□□ -2.16
SRPXP78539 SNORA8-201ENST00000384574 139 ntBASIC1.53□□□□□ -2.16
SRPXP78539 AL079342.1-201ENST00000401460 267 ntBASIC1.53□□□□□ -2.16
SRPXP78539 MIR1302-11-201ENST00000408051 138 ntBASIC1.53□□□□□ -2.16
SRPXP78539 MIR1302-9-201ENST00000408365 138 ntBASIC1.53□□□□□ -2.16
SRPXP78539 MIR1302-10-201ENST00000408734 138 ntBASIC1.53□□□□□ -2.16
SRPXP78539 RNA5SP100-201ENST00000410903 110 ntBASIC1.53□□□□□ -2.16
SRPXP78539 RNA5SP59-201ENST00000410922 110 ntBASIC1.53□□□□□ -2.16
SRPXP78539 RNU6-130P-201ENST00000411112 103 ntBASIC1.53□□□□□ -2.16
SRPXP78539 AC005002.2-201ENST00000438228 269 ntBASIC1.53□□□□□ -2.16
SRPXP78539 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.53□□□□□ -2.16
SRPXP78539 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.53□□□□□ -2.16
SRPXP78539 AC010409.1-201ENST00000487382 476 ntBASIC1.53□□□□□ -2.16
SRPXP78539 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.53□□□□□ -2.16
SRPXP78539 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SRPXP78539 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.53□□□□□ -2.16
SRPXP78539 AC023157.2-201ENST00000540596 141 ntBASIC1.53□□□□□ -2.16
SRPXP78539 MIR4299-201ENST00000577899 72 ntBASIC1.53□□□□□ -2.16
SRPXP78539 RPS29P30-201ENST00000600975 111 ntBASIC1.53□□□□□ -2.16
SRPXP78539 AC104695.3-201ENST00000604052 296 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms