Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERVK_113P62684 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.01□□□□□ -1.93
HERVK_113P62684 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HERVK_113P62684 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
HERVK_113P62684 RNU6-545P-201ENST00000362681 104 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 RNU6-944P-201ENST00000364023 107 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 Y_RNA.308-201ENST00000365043 101 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 RNU6-1328P-201ENST00000410938 106 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 AC104332.1-201ENST00000440471 797 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 RPL39P40-201ENST00000445481 146 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 RNU7-120P-201ENST00000459334 63 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 SRIP1-201ENST00000489235 288 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.01□□□□□ -1.93
HERVK_113P62684 SEM1P1-201ENST00000506694 209 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.01□□□□□ -1.93
HERVK_113P62684 RNA5SP320-201ENST00000516263 124 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 SNORA9.3-201ENST00000516383 129 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 RNU6-586P-201ENST00000517265 104 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 MIR4635-201ENST00000583759 79 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 AC011921.3-201ENST00000605540 361 ntBASIC3.01□□□□□ -1.93
HERVK_113P62684 ZNF658B-202ENST00000615961 3375 ntBASIC3□□□□□ -1.93
HERVK_113P62684 RNA5SP289-201ENST00000362332 137 ntBASIC3□□□□□ -1.93
HERVK_113P62684 Y_RNA.180-201ENST00000363867 113 ntBASIC3□□□□□ -1.93
HERVK_113P62684 RNU6-211P-201ENST00000384047 107 ntBASIC3□□□□□ -1.93
HERVK_113P62684 AL031003.1-201ENST00000404229 172 ntBASIC3□□□□□ -1.93
HERVK_113P62684 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3□□□□□ -1.93
HERVK_113P62684 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3□□□□□ -1.93
HERVK_113P62684 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3□□□□□ -1.93
HERVK_113P62684 SNORD2.1-201ENST00000458762 69 ntBASIC3□□□□□ -1.93
HERVK_113P62684 AC090515.1-201ENST00000465295 476 ntBASIC3□□□□□ -1.93
HERVK_113P62684 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3□□□□□ -1.93
HERVK_113P62684 RNU6-861P-201ENST00000516745 106 ntBASIC3□□□□□ -1.93
HERVK_113P62684 AL137100.2-201ENST00000555786 315 ntBASIC3□□□□□ -1.93
HERVK_113P62684 AL713866.2-201ENST00000603579 219 ntBASIC3□□□□□ -1.93
HERVK_113P62684 AC008873.1-201ENST00000625051 138 ntBASIC3□□□□□ -1.93
HERVK_113P62684 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
HERVK_113P62684 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HERVK_113P62684 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.99□□□□□ -1.93
HERVK_113P62684 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HERVK_113P62684 RNU1-72P-201ENST00000362976 153 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 U8.2-201ENST00000363156 134 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 SNORD115-30-201ENST00000364117 82 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 MIR586-201ENST00000385035 97 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 MIR27B-201ENST00000385129 97 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 RNU6-493P-201ENST00000391321 108 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 AL513477.1-202ENST00000417061 214 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 SCARNA3-201ENST00000517097 143 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.99□□□□□ -1.93
HERVK_113P62684 AC009127.3-201ENST00000570531 403 ntBASIC2.99□□□□□ -1.93
HERVK_113P62684 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.99□□□□□ -1.93
HERVK_113P62684 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
HERVK_113P62684 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HERVK_113P62684 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.99□□□□□ -1.93
HERVK_113P62684 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HERVK_113P62684 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HERVK_113P62684 AC138915.1-201ENST00000565427 1685 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.98□□□□□ -1.93
HERVK_113P62684 RNU6-1272P-201ENST00000362776 107 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 MIR518C-201ENST00000384822 101 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 MIR548M-201ENST00000408260 86 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 Z96811.1-201ENST00000445880 108 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 HMGN2P9-201ENST00000476875 229 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 CKS1BP2-201ENST00000497342 240 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.98□□□□□ -1.93
HERVK_113P62684 RNU6-965P-201ENST00000516721 96 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.98□□□□□ -1.93
HERVK_113P62684 AP005660.1-201ENST00000522972 293 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 MIR4753-201ENST00000585119 83 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 U4.3-201ENST00000621047 82 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 MIR7157-201ENST00000635801 60 ntBASIC2.98□□□□□ -1.93
HERVK_113P62684 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HERVK_113P62684 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HERVK_113P62684 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HERVK_113P62684 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HERVK_113P62684 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HERVK_113P62684 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.97□□□□□ -1.93
HERVK_113P62684 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HERVK_113P62684 Y_RNA.262-201ENST00000364641 102 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 RNU6-234P-201ENST00000365229 104 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 PCNPP3-201ENST00000393579 471 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 MIR1283-1-201ENST00000408494 87 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 AC105245.1-201ENST00000581934 244 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 AC069294.1-201ENST00000608397 350 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 AL008718.3-201ENST00000610217 321 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 AL365265.1-201ENST00000621045 234 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 U6.115-201ENST00000636045 103 ntBASIC2.97□□□□□ -1.93
HERVK_113P62684 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HERVK_113P62684 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HERVK_113P62684 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
HERVK_113P62684 RNU6-682P-201ENST00000363843 106 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 Y_RNA.243-201ENST00000364481 109 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 SNORD14D-201ENST00000384390 87 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 MIR592-201ENST00000384959 97 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 U6atac.2-201ENST00000408644 118 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 RNU4-61P-201ENST00000411243 107 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 AC074290.1-201ENST00000448883 135 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 AC072026.1-201ENST00000605023 201 ntBASIC2.96□□□□□ -1.94
HERVK_113P62684 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms