Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.54□□□□□ -2
EIF4A1P60842 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
EIF4A1P60842 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
EIF4A1P60842 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.53□□□□□ -2
EIF4A1P60842 AC005336.3-201ENST00000623833 2679 ntBASIC2.53□□□□□ -2
EIF4A1P60842 SNORD87-201ENST00000364849 89 ntBASIC2.53□□□□□ -2
EIF4A1P60842 RNA5SP160-201ENST00000364866 120 ntBASIC2.53□□□□□ -2
EIF4A1P60842 RNU6-546P-201ENST00000383991 107 ntBASIC2.53□□□□□ -2
EIF4A1P60842 SNORA67.2-201ENST00000384300 149 ntBASIC2.53□□□□□ -2
EIF4A1P60842 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
EIF4A1P60842 RPL21P38-201ENST00000418090 167 ntBASIC2.53□□□□□ -2
EIF4A1P60842 AC005002.2-201ENST00000438228 269 ntBASIC2.53□□□□□ -2
EIF4A1P60842 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.53□□□□□ -2
EIF4A1P60842 IPO7P1-201ENST00000442031 636 ntBASIC2.53□□□□□ -2
EIF4A1P60842 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.53□□□□□ -2
EIF4A1P60842 RNU6-625P-201ENST00000459412 107 ntBASIC2.53□□□□□ -2
EIF4A1P60842 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.53□□□□□ -2
EIF4A1P60842 AP003733.2-201ENST00000529409 171 ntBASIC2.53□□□□□ -2
EIF4A1P60842 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.53□□□□□ -2
EIF4A1P60842 MIR4300-201ENST00000581016 96 ntBASIC2.53□□□□□ -2
EIF4A1P60842 MIR8062-201ENST00000621515 85 ntBASIC2.53□□□□□ -2
EIF4A1P60842 MIR1248-201ENST00000629190 106 ntBASIC2.53□□□□□ -2
EIF4A1P60842 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.52□□□□□ -2.01
EIF4A1P60842 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 LINC02555-201ENST00000563933 1951 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 RNU6-626P-201ENST00000363354 107 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 RNU6-20P-201ENST00000384106 107 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 SNORD115-46-201ENST00000390982 71 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 SNORA26.9-201ENST00000391322 122 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 RNU7-14P-201ENST00000459331 62 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 AC098869.1-201ENST00000481627 292 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 ATP5EP1-201ENST00000510257 156 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 HMGB3P3-201ENST00000510526 400 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 RNA5SP182-201ENST00000516064 82 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.52□□□□□ -2.01
EIF4A1P60842 AC022616.8-201ENST00000533569 253 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.52□□□□□ -2.01
EIF4A1P60842 AL161670.1-201ENST00000554348 137 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 MIR3149-201ENST00000584629 83 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 AP000942.4-201ENST00000604811 241 ntBASIC2.52□□□□□ -2.01
EIF4A1P60842 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
EIF4A1P60842 Y_RNA.452-201ENST00000384202 108 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 Y_RNA.498-201ENST00000384460 102 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.51□□□□□ -2.01
EIF4A1P60842 RAB28P5-201ENST00000427490 651 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.51□□□□□ -2.01
EIF4A1P60842 Y_RNA.638-201ENST00000459374 113 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 RPL23AP42-201ENST00000471152 471 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 AK6P2-201ENST00000549020 471 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 U4.1-201ENST00000620349 87 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 AC008873.1-201ENST00000625051 138 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 MIR203B-201ENST00000636080 86 ntBASIC2.51□□□□□ -2.01
EIF4A1P60842 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
EIF4A1P60842 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
EIF4A1P60842 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
EIF4A1P60842 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
EIF4A1P60842 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
EIF4A1P60842 AC009487.4-201ENST00000624969 3585 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 RNU6-545P-201ENST00000362681 104 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 Y_RNA.396-201ENST00000383949 103 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 SNORD63-201ENST00000384262 68 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 Y_RNA.462-201ENST00000384268 102 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 RPL23AP7-203ENST00000449021 469 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 AL021397.1-201ENST00000451806 248 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 AC108210.2-201ENST00000503681 201 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
EIF4A1P60842 RNU6-107P-201ENST00000516643 102 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.5□□□□□ -2.01
EIF4A1P60842 AC055872.1-201ENST00000570978 278 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 MIR4423-201ENST00000580922 80 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
EIF4A1P60842 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
EIF4A1P60842 Y_RNA.193-201ENST00000363979 102 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 RNU6-743P-201ENST00000364151 106 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 RNU6-1305P-201ENST00000364353 104 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 Y_RNA.376-201ENST00000365638 108 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 Y_RNA.461-201ENST00000384263 103 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 RNU6-472P-201ENST00000384299 107 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 RNU6-1026P-201ENST00000384465 108 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 MIR586-201ENST00000385035 97 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 MIR561-201ENST00000385216 97 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 RNU2-48P-201ENST00000410694 191 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.49□□□□□ -2.01
EIF4A1P60842 HMGN2P9-201ENST00000476875 229 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 AC018868.1-201ENST00000491307 315 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 RNU6-570P-201ENST00000517051 105 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.49□□□□□ -2.01
EIF4A1P60842 AP002001.1-203ENST00000534002 267 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.49□□□□□ -2.01
EIF4A1P60842 AC005176.2-201ENST00000596933 147 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 MIR6895-201ENST00000613497 78 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.49□□□□□ -2.01
EIF4A1P60842 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.49□□□□□ -2.01
EIF4A1P60842 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
EIF4A1P60842 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
EIF4A1P60842 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
EIF4A1P60842 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms