Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SNORD3E-202ENST00000627253 216 ntBASIC0.9□□□□□ -2.27
CDH6P55285 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.9□□□□□ -2.27
CDH6P55285 AC018630.2-201ENST00000534866 2403 ntBASIC0.89□□□□□ -2.27
CDH6P55285 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CDH6P55285 U3.8-201ENST00000363675 217 ntBASIC0.89□□□□□ -2.27
CDH6P55285 RNU6-505P-201ENST00000384427 107 ntBASIC0.89□□□□□ -2.27
CDH6P55285 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.89□□□□□ -2.27
CDH6P55285 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.89□□□□□ -2.27
CDH6P55285 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.89□□□□□ -2.27
CDH6P55285 HMGN2P26-201ENST00000463169 339 ntBASIC0.89□□□□□ -2.27
CDH6P55285 AC091179.3-201ENST00000474761 144 ntBASIC0.89□□□□□ -2.27
CDH6P55285 AC019235.1-201ENST00000503847 207 ntBASIC0.89□□□□□ -2.27
CDH6P55285 ACA59.1-201ENST00000515966 143 ntBASIC0.89□□□□□ -2.27
CDH6P55285 SNORA31.2-201ENST00000516019 134 ntBASIC0.89□□□□□ -2.27
CDH6P55285 RNU7-99P-201ENST00000516271 62 ntBASIC0.89□□□□□ -2.27
CDH6P55285 AC027419.1-201ENST00000522976 328 ntBASIC0.89□□□□□ -2.27
CDH6P55285 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
CDH6P55285 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.89□□□□□ -2.27
CDH6P55285 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
CDH6P55285 GHRLOS.1-201ENST00000610995 70 ntBASIC0.89□□□□□ -2.27
CDH6P55285 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.89□□□□□ -2.27
CDH6P55285 Y_RNA.51-201ENST00000362725 102 ntBASIC0.88□□□□□ -2.27
CDH6P55285 RNU4-79P-201ENST00000362764 141 ntBASIC0.88□□□□□ -2.27
CDH6P55285 MIR660-201ENST00000385235 97 ntBASIC0.88□□□□□ -2.27
CDH6P55285 RNU6-1054P-201ENST00000411293 104 ntBASIC0.88□□□□□ -2.27
CDH6P55285 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.88□□□□□ -2.27
CDH6P55285 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.88□□□□□ -2.27
CDH6P55285 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.88□□□□□ -2.27
CDH6P55285 RNU7-66P-201ENST00000459469 62 ntBASIC0.88□□□□□ -2.27
CDH6P55285 MIR4778-201ENST00000577635 80 ntBASIC0.88□□□□□ -2.27
CDH6P55285 AC092954.2-201ENST00000609103 430 ntBASIC0.88□□□□□ -2.27
CDH6P55285 AL138726.1-201ENST00000614873 333 ntBASIC0.88□□□□□ -2.27
CDH6P55285 AC009248.2-201ENST00000619826 254 ntBASIC0.88□□□□□ -2.27
CDH6P55285 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
CDH6P55285 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
CDH6P55285 RNU4-76P-201ENST00000364509 141 ntBASIC0.87□□□□□ -2.27
CDH6P55285 RNU6-793P-201ENST00000384233 104 ntBASIC0.87□□□□□ -2.27
CDH6P55285 RNU6-910P-201ENST00000390844 107 ntBASIC0.87□□□□□ -2.27
CDH6P55285 SNORD12-201ENST00000391002 90 ntBASIC0.87□□□□□ -2.27
CDH6P55285 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
CDH6P55285 TRBVA-201ENST00000498804 316 ntBASIC0.87□□□□□ -2.27
CDH6P55285 RNU6-256P-201ENST00000516747 97 ntBASIC0.87□□□□□ -2.27
CDH6P55285 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
CDH6P55285 MIR4438-201ENST00000585271 93 ntBASIC0.87□□□□□ -2.27
CDH6P55285 AC019193.3-201ENST00000609144 554 ntBASIC0.87□□□□□ -2.27
CDH6P55285 RNU6-137P-201ENST00000363680 108 ntBASIC0.86□□□□□ -2.27
CDH6P55285 Y_RNA.256-201ENST00000364594 104 ntBASIC0.86□□□□□ -2.27
CDH6P55285 SNORD116-1-201ENST00000384335 95 ntBASIC0.86□□□□□ -2.27
CDH6P55285 RNU6-306P-201ENST00000384617 107 ntBASIC0.86□□□□□ -2.27
CDH6P55285 RNU11-5P-201ENST00000391216 129 ntBASIC0.86□□□□□ -2.27
CDH6P55285 RNU6-908P-201ENST00000410160 94 ntBASIC0.86□□□□□ -2.27
CDH6P55285 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
CDH6P55285 STAG3L5P-204ENST00000443759 179 ntBASIC0.86□□□□□ -2.27
CDH6P55285 AC105758.1-201ENST00000506038 399 ntBASIC0.86□□□□□ -2.27
CDH6P55285 SCARNA16.2-201ENST00000516520 172 ntBASIC0.86□□□□□ -2.27
CDH6P55285 APOOP3-201ENST00000536787 586 ntBASIC0.86□□□□□ -2.27
CDH6P55285 AC023157.2-201ENST00000540596 141 ntBASIC0.86□□□□□ -2.27
CDH6P55285 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
CDH6P55285 SNORA28-201ENST00000606769 126 ntBASIC0.86□□□□□ -2.27
CDH6P55285 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.86□□□□□ -2.27
CDH6P55285 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.86□□□□□ -2.27
CDH6P55285 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CDH6P55285 MIR96-201ENST00000362288 78 ntBASIC0.85□□□□□ -2.27
CDH6P55285 Y_RNA.4-201ENST00000362333 112 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RNU6-451P-201ENST00000362921 107 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RNU6-280P-201ENST00000364145 104 ntBASIC0.85□□□□□ -2.27
CDH6P55285 Y_RNA.212-201ENST00000364177 102 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RNU6-17P-201ENST00000384245 107 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RNU6-18P-201ENST00000384527 107 ntBASIC0.85□□□□□ -2.27
CDH6P55285 Y_RNA.530-201ENST00000384587 101 ntBASIC0.85□□□□□ -2.27
CDH6P55285 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CDH6P55285 RNU6-159P-201ENST00000391080 106 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
CDH6P55285 MIR1276-201ENST00000408707 83 ntBASIC0.85□□□□□ -2.27
CDH6P55285 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.85□□□□□ -2.27
CDH6P55285 AC063976.4-201ENST00000421971 163 ntBASIC0.85□□□□□ -2.27
CDH6P55285 MTATP6P13-201ENST00000438531 667 ntBASIC0.85□□□□□ -2.27
CDH6P55285 MTND4P18-201ENST00000447010 465 ntBASIC0.85□□□□□ -2.27
CDH6P55285 AP000870.1-201ENST00000472927 406 ntBASIC0.85□□□□□ -2.27
CDH6P55285 AC048334.1-201ENST00000477975 159 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RPS27P22-201ENST00000478056 241 ntBASIC0.85□□□□□ -2.27
CDH6P55285 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
CDH6P55285 RN7SKP49-201ENST00000516675 260 ntBASIC0.85□□□□□ -2.27
CDH6P55285 MIR3672-201ENST00000584290 82 ntBASIC0.85□□□□□ -2.27
CDH6P55285 PIGPP4-201ENST00000584447 307 ntBASIC0.85□□□□□ -2.27
CDH6P55285 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
CDH6P55285 AC124303.1-201ENST00000605703 360 ntBASIC0.85□□□□□ -2.27
CDH6P55285 AC245008.1-201ENST00000608123 476 ntBASIC0.85□□□□□ -2.27
CDH6P55285 AC068700.1-201ENST00000565862 3754 ntBASIC0.84□□□□□ -2.27
CDH6P55285 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
CDH6P55285 Y_RNA.38-201ENST00000362617 102 ntBASIC0.84□□□□□ -2.27
CDH6P55285 RNU6-199P-201ENST00000362954 107 ntBASIC0.84□□□□□ -2.27
CDH6P55285 Y_RNA.100-201ENST00000363141 102 ntBASIC0.84□□□□□ -2.27
CDH6P55285 Y_RNA.135-201ENST00000363439 95 ntBASIC0.84□□□□□ -2.27
CDH6P55285 Y_RNA.179-201ENST00000363844 90 ntBASIC0.84□□□□□ -2.27
CDH6P55285 Y_RNA.184-201ENST00000363884 108 ntBASIC0.84□□□□□ -2.27
CDH6P55285 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
CDH6P55285 MIR653-201ENST00000385279 96 ntBASIC0.84□□□□□ -2.27
CDH6P55285 RNU6-332P-201ENST00000391193 108 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms