Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNU6-700P-201ENST00000391043 107 ntBASIC1.88□□□□□ -2.11
LBX1P52954 AL356379.1-201ENST00000414105 126 ntBASIC1.88□□□□□ -2.11
LBX1P52954 AC236972.2-201ENST00000434979 310 ntBASIC1.88□□□□□ -2.11
LBX1P52954 AL137792.2-201ENST00000443484 235 ntBASIC1.88□□□□□ -2.11
LBX1P52954 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.88□□□□□ -2.11
LBX1P52954 AC010531.2-201ENST00000465012 153 ntBASIC1.88□□□□□ -2.11
LBX1P52954 AC091179.3-201ENST00000474761 144 ntBASIC1.88□□□□□ -2.11
LBX1P52954 RPS27P21-201ENST00000486977 252 ntBASIC1.88□□□□□ -2.11
LBX1P52954 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.88□□□□□ -2.11
LBX1P52954 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.88□□□□□ -2.11
LBX1P52954 RN7SL793P-201ENST00000583259 296 ntBASIC1.88□□□□□ -2.11
LBX1P52954 AC078899.2-201ENST00000595282 212 ntBASIC1.88□□□□□ -2.11
LBX1P52954 SNRPGP20-201ENST00000604477 205 ntBASIC1.88□□□□□ -2.11
LBX1P52954 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.88□□□□□ -2.11
LBX1P52954 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
LBX1P52954 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.88□□□□□ -2.11
LBX1P52954 MTND4P29-201ENST00000503122 1372 ntBASIC1.87□□□□□ -2.11
LBX1P52954 RNU4-42P-201ENST00000364738 142 ntBASIC1.87□□□□□ -2.11
LBX1P52954 RNU6-318P-201ENST00000384283 103 ntBASIC1.87□□□□□ -2.11
LBX1P52954 Y_RNA.579-201ENST00000390939 94 ntBASIC1.87□□□□□ -2.11
LBX1P52954 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
LBX1P52954 AC123900.1-201ENST00000420390 96 ntBASIC1.87□□□□□ -2.11
LBX1P52954 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.87□□□□□ -2.11
LBX1P52954 USP9YP16-201ENST00000430287 407 ntBASIC1.87□□□□□ -2.11
LBX1P52954 CHEK2P4-201ENST00000450340 246 ntBASIC1.87□□□□□ -2.11
LBX1P52954 USP9YP23-201ENST00000455085 407 ntBASIC1.87□□□□□ -2.11
LBX1P52954 RNU1-131P-201ENST00000458943 161 ntBASIC1.87□□□□□ -2.11
LBX1P52954 MTND5P16-201ENST00000460269 1703 ntBASIC1.87□□□□□ -2.11
LBX1P52954 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.87□□□□□ -2.11
LBX1P52954 Y_RNA.675-201ENST00000516389 149 ntBASIC1.87□□□□□ -2.11
LBX1P52954 RNU2-44P-201ENST00000516795 194 ntBASIC1.87□□□□□ -2.11
LBX1P52954 MIR1244-1-201ENST00000612829 85 ntBASIC1.87□□□□□ -2.11
LBX1P52954 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
LBX1P52954 AL160413.1-201ENST00000622780 310 ntBASIC1.87□□□□□ -2.11
LBX1P52954 MIR1244-3-201ENST00000635744 85 ntBASIC1.87□□□□□ -2.11
LBX1P52954 MIR1244-2-201ENST00000636449 85 ntBASIC1.87□□□□□ -2.11
LBX1P52954 MIR1244-4-202ENST00000636813 85 ntBASIC1.87□□□□□ -2.11
LBX1P52954 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
LBX1P52954 Y_RNA.557-201ENST00000384680 107 ntBASIC1.86□□□□□ -2.11
LBX1P52954 MIR518A2-201ENST00000384966 87 ntBASIC1.86□□□□□ -2.11
LBX1P52954 MIR29C-201ENST00000385231 88 ntBASIC1.86□□□□□ -2.11
LBX1P52954 MIR1283-1-201ENST00000408494 87 ntBASIC1.86□□□□□ -2.11
LBX1P52954 AC007098.1-201ENST00000420122 367 ntBASIC1.86□□□□□ -2.11
LBX1P52954 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
LBX1P52954 MTND4P28-201ENST00000426217 387 ntBASIC1.86□□□□□ -2.11
LBX1P52954 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
LBX1P52954 RNU7-14P-201ENST00000459331 62 ntBASIC1.86□□□□□ -2.11
LBX1P52954 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
LBX1P52954 RPS23P5-201ENST00000495419 428 ntBASIC1.86□□□□□ -2.11
LBX1P52954 AC105758.1-201ENST00000506038 399 ntBASIC1.86□□□□□ -2.11
LBX1P52954 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.86□□□□□ -2.11
LBX1P52954 RNU6-976P-201ENST00000516086 111 ntBASIC1.86□□□□□ -2.11
LBX1P52954 RNU5F-4P-201ENST00000516581 114 ntBASIC1.86□□□□□ -2.11
LBX1P52954 RNU6-699P-201ENST00000517081 110 ntBASIC1.86□□□□□ -2.11
LBX1P52954 MIR3126-201ENST00000577443 74 ntBASIC1.86□□□□□ -2.11
LBX1P52954 AC026271.5-201ENST00000577873 130 ntBASIC1.86□□□□□ -2.11
LBX1P52954 MIR3169-201ENST00000578032 83 ntBASIC1.86□□□□□ -2.11
LBX1P52954 CYP2C61P-201ENST00000604072 290 ntBASIC1.86□□□□□ -2.11
LBX1P52954 AL080274.1-201ENST00000605565 220 ntBASIC1.86□□□□□ -2.11
LBX1P52954 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
LBX1P52954 AC083806.3-201ENST00000614016 455 ntBASIC1.86□□□□□ -2.11
LBX1P52954 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.86□□□□□ -2.11
LBX1P52954 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
LBX1P52954 AC131280.1-202ENST00000624067 4211 ntBASIC1.85□□□□□ -2.11
LBX1P52954 Y_RNA.146-201ENST00000363549 102 ntBASIC1.85□□□□□ -2.11
LBX1P52954 SNORD114-27-201ENST00000363766 70 ntBASIC1.85□□□□□ -2.11
LBX1P52954 Y_RNA.197-201ENST00000364004 102 ntBASIC1.85□□□□□ -2.11
LBX1P52954 RNU6-280P-201ENST00000364145 104 ntBASIC1.85□□□□□ -2.11
LBX1P52954 RNU1-115P-201ENST00000365329 160 ntBASIC1.85□□□□□ -2.11
LBX1P52954 Y_RNA.419-201ENST00000384041 102 ntBASIC1.85□□□□□ -2.11
LBX1P52954 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
LBX1P52954 MIR329-1-201ENST00000385028 80 ntBASIC1.85□□□□□ -2.11
LBX1P52954 MIR300-201ENST00000401138 83 ntBASIC1.85□□□□□ -2.11
LBX1P52954 Y_RNA.592-201ENST00000410274 109 ntBASIC1.85□□□□□ -2.11
LBX1P52954 RNU6-1156P-201ENST00000410365 100 ntBASIC1.85□□□□□ -2.11
LBX1P52954 RNU6-1001P-201ENST00000411265 100 ntBASIC1.85□□□□□ -2.11
LBX1P52954 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.85□□□□□ -2.11
LBX1P52954 AL357134.1-201ENST00000445848 426 ntBASIC1.85□□□□□ -2.11
LBX1P52954 NDUFB4P10-201ENST00000452541 359 ntBASIC1.85□□□□□ -2.11
LBX1P52954 MIR2053-201ENST00000459295 91 ntBASIC1.85□□□□□ -2.11
LBX1P52954 AC055731.1-201ENST00000474387 401 ntBASIC1.85□□□□□ -2.11
LBX1P52954 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.85□□□□□ -2.11
LBX1P52954 RNU6-911P-201ENST00000516523 104 ntBASIC1.85□□□□□ -2.11
LBX1P52954 RNU6-856P-201ENST00000516959 98 ntBASIC1.85□□□□□ -2.11
LBX1P52954 RNU2-19P-201ENST00000517288 84 ntBASIC1.85□□□□□ -2.11
LBX1P52954 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.85□□□□□ -2.11
LBX1P52954 MIR5006-201ENST00000583027 110 ntBASIC1.85□□□□□ -2.11
LBX1P52954 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.85□□□□□ -2.11
LBX1P52954 uc_338.22-201ENST00000622722 187 ntBASIC1.85□□□□□ -2.11
LBX1P52954 AC068205.3-201ENST00000636385 468 ntBASIC1.85□□□□□ -2.11
LBX1P52954 LINC02555-201ENST00000563933 1951 ntBASIC1.85□□□□□ -2.11
LBX1P52954 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LBX1P52954 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
LBX1P52954 SNORD115-3-201ENST00000363100 82 ntBASIC1.84□□□□□ -2.11
LBX1P52954 SNORD114-6-201ENST00000364393 72 ntBASIC1.84□□□□□ -2.11
LBX1P52954 Y_RNA.431-201ENST00000384086 102 ntBASIC1.84□□□□□ -2.11
LBX1P52954 RNU6-1145P-201ENST00000384246 107 ntBASIC1.84□□□□□ -2.11
LBX1P52954 U3.40-201ENST00000408706 208 ntBASIC1.84□□□□□ -2.11
LBX1P52954 RNA5SP450-201ENST00000411206 102 ntBASIC1.84□□□□□ -2.11
LBX1P52954 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms