Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.287-201ENST00000364853 94 ntBASIC2.29□□□□□ -2.04
NEK3P51956 MIR520A-201ENST00000384862 85 ntBASIC2.29□□□□□ -2.04
NEK3P51956 MIR1302-11-201ENST00000408051 138 ntBASIC2.29□□□□□ -2.04
NEK3P51956 MIR1302-9-201ENST00000408365 138 ntBASIC2.29□□□□□ -2.04
NEK3P51956 MIR1302-10-201ENST00000408734 138 ntBASIC2.29□□□□□ -2.04
NEK3P51956 AC096644.2-201ENST00000429278 159 ntBASIC2.29□□□□□ -2.04
NEK3P51956 Y_RNA.631-201ENST00000459607 101 ntBASIC2.29□□□□□ -2.04
NEK3P51956 RPL26P26-201ENST00000480251 434 ntBASIC2.29□□□□□ -2.04
NEK3P51956 RNU6-408P-201ENST00000515910 100 ntBASIC2.29□□□□□ -2.04
NEK3P51956 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.29□□□□□ -2.04
NEK3P51956 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.29□□□□□ -2.04
NEK3P51956 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.29□□□□□ -2.04
NEK3P51956 AC008749.1-201ENST00000597650 306 ntBASIC2.29□□□□□ -2.04
NEK3P51956 MIR1302-2-201ENST00000607096 138 ntBASIC2.29□□□□□ -2.04
NEK3P51956 AC006157.1-201ENST00000611750 366 ntBASIC2.29□□□□□ -2.04
NEK3P51956 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.29□□□□□ -2.04
NEK3P51956 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
NEK3P51956 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEK3P51956 AC010615.1-201ENST00000594254 1764 ntBASIC2.28□□□□□ -2.04
NEK3P51956 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
NEK3P51956 CENPCP1-201ENST00000533085 2578 ntBASIC2.28□□□□□ -2.04
NEK3P51956 RNU6-112P-201ENST00000363599 104 ntBASIC2.28□□□□□ -2.04
NEK3P51956 RNU6-271P-201ENST00000363858 105 ntBASIC2.28□□□□□ -2.04
NEK3P51956 Y_RNA.230-201ENST00000364348 109 ntBASIC2.28□□□□□ -2.04
NEK3P51956 RNU6-417P-201ENST00000384712 107 ntBASIC2.28□□□□□ -2.04
NEK3P51956 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
NEK3P51956 MCFD2P1-201ENST00000417812 300 ntBASIC2.28□□□□□ -2.04
NEK3P51956 DPH3P2-201ENST00000422618 250 ntBASIC2.28□□□□□ -2.04
NEK3P51956 AC010154.1-201ENST00000425857 269 ntBASIC2.28□□□□□ -2.04
NEK3P51956 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.28□□□□□ -2.04
NEK3P51956 SNORD65B-201ENST00000459126 73 ntBASIC2.28□□□□□ -2.04
NEK3P51956 RNA5SP57-201ENST00000459463 123 ntBASIC2.28□□□□□ -2.04
NEK3P51956 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.28□□□□□ -2.04
NEK3P51956 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.28□□□□□ -2.04
NEK3P51956 SNORA25.10-201ENST00000515926 124 ntBASIC2.28□□□□□ -2.04
NEK3P51956 RN7SKP295-201ENST00000517264 153 ntBASIC2.28□□□□□ -2.04
NEK3P51956 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.28□□□□□ -2.04
NEK3P51956 AL121655.1-201ENST00000605811 308 ntBASIC2.28□□□□□ -2.04
NEK3P51956 AL359075.3-201ENST00000613288 217 ntBASIC2.28□□□□□ -2.04
NEK3P51956 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.28□□□□□ -2.04
NEK3P51956 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.28□□□□□ -2.04
NEK3P51956 U6.92-201ENST00000636464 89 ntBASIC2.28□□□□□ -2.04
NEK3P51956 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NEK3P51956 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.28□□□□□ -2.04
NEK3P51956 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NEK3P51956 MTND5P6-201ENST00000422338 1798 ntBASIC2.28□□□□□ -2.04
NEK3P51956 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
NEK3P51956 Y_RNA.80-201ENST00000362996 102 ntBASIC2.27□□□□□ -2.05
NEK3P51956 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.27□□□□□ -2.05
NEK3P51956 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NEK3P51956 MTND4P19-201ENST00000446659 478 ntBASIC2.27□□□□□ -2.05
NEK3P51956 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.27□□□□□ -2.05
NEK3P51956 MIR514B-201ENST00000516774 80 ntBASIC2.27□□□□□ -2.05
NEK3P51956 RNA5SP481-201ENST00000516814 122 ntBASIC2.27□□□□□ -2.05
NEK3P51956 HSBP1P1-201ENST00000555205 166 ntBASIC2.27□□□□□ -2.05
NEK3P51956 MIR4659A-201ENST00000580269 81 ntBASIC2.27□□□□□ -2.05
NEK3P51956 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.27□□□□□ -2.05
NEK3P51956 U6.73-201ENST00000619194 103 ntBASIC2.27□□□□□ -2.05
NEK3P51956 AC091932.3-201ENST00000624223 323 ntBASIC2.27□□□□□ -2.05
NEK3P51956 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.27□□□□□ -2.05
NEK3P51956 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
NEK3P51956 SNORA63D-201ENST00000364359 132 ntBASIC2.26□□□□□ -2.05
NEK3P51956 RNU4-50P-201ENST00000364361 141 ntBASIC2.26□□□□□ -2.05
NEK3P51956 AC117470.1-201ENST00000381974 330 ntBASIC2.26□□□□□ -2.05
NEK3P51956 MIR221-201ENST00000385135 110 ntBASIC2.26□□□□□ -2.05
NEK3P51956 MIR1261-201ENST00000408659 82 ntBASIC2.26□□□□□ -2.05
NEK3P51956 RNA5SP338-201ENST00000410495 85 ntBASIC2.26□□□□□ -2.05
NEK3P51956 AC245047.4-201ENST00000433189 144 ntBASIC2.26□□□□□ -2.05
NEK3P51956 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.26□□□□□ -2.05
NEK3P51956 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.26□□□□□ -2.05
NEK3P51956 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.26□□□□□ -2.05
NEK3P51956 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NEK3P51956 RNU1-142P-201ENST00000516682 145 ntBASIC2.26□□□□□ -2.05
NEK3P51956 RNU6-988P-201ENST00000519081 107 ntBASIC2.26□□□□□ -2.05
NEK3P51956 AC084364.2-201ENST00000546924 395 ntBASIC2.26□□□□□ -2.05
NEK3P51956 MIR4648-201ENST00000580107 72 ntBASIC2.26□□□□□ -2.05
NEK3P51956 AC005828.6-201ENST00000606610 232 ntBASIC2.26□□□□□ -2.05
NEK3P51956 SNORD58B-201ENST00000607313 66 ntBASIC2.26□□□□□ -2.05
NEK3P51956 AC240442.1-201ENST00000616055 283 ntBASIC2.26□□□□□ -2.05
NEK3P51956 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
NEK3P51956 AC005592.1-201ENST00000566527 1640 ntBASIC2.25□□□□□ -2.05
NEK3P51956 Y_RNA.28-201ENST00000362554 111 ntBASIC2.25□□□□□ -2.05
NEK3P51956 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NEK3P51956 RNA5SP323-201ENST00000391094 133 ntBASIC2.25□□□□□ -2.05
NEK3P51956 AL390729.2-201ENST00000416137 156 ntBASIC2.25□□□□□ -2.05
NEK3P51956 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.25□□□□□ -2.05
NEK3P51956 RPS29P21-201ENST00000496272 170 ntBASIC2.25□□□□□ -2.05
NEK3P51956 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NEK3P51956 AC006380.1-201ENST00000603598 186 ntBASIC2.25□□□□□ -2.05
NEK3P51956 Y_RNA.772-201ENST00000606692 102 ntBASIC2.25□□□□□ -2.05
NEK3P51956 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NEK3P51956 RNU6-961P-201ENST00000363893 105 ntBASIC2.24□□□□□ -2.05
NEK3P51956 Y_RNA.243-201ENST00000364481 109 ntBASIC2.24□□□□□ -2.05
NEK3P51956 RNU6-926P-201ENST00000384075 107 ntBASIC2.24□□□□□ -2.05
NEK3P51956 RNU6-296P-201ENST00000384608 107 ntBASIC2.24□□□□□ -2.05
NEK3P51956 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NEK3P51956 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.24□□□□□ -2.05
NEK3P51956 PMCHL1-202ENST00000423102 261 ntBASIC2.24□□□□□ -2.05
NEK3P51956 MTCO2P12-201ENST00000427426 682 ntBASIC2.24□□□□□ -2.05
NEK3P51956 FTH1P12-201ENST00000432137 551 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms