Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 U4.1-201ENST00000620349 87 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLCN3P51790 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLCN3P51790 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLCN3P51790 RNU6-770P-201ENST00000363929 105 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 SNORA3A-201ENST00000364113 130 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 Y_RNA.222-201ENST00000364264 102 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 SNORD14D-201ENST00000384390 87 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 SNORD115-46-201ENST00000390982 71 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCN3P51790 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCN3P51790 AC004386.2-201ENST00000441858 148 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 DYNLT3P2-201ENST00000442517 295 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 AC016925.1-201ENST00000458303 298 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 LINC01399-202ENST00000458450 244 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 RNU7-14P-201ENST00000459331 62 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 RNU6-295P-201ENST00000516901 104 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 AC087441.2-201ENST00000529141 262 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 AC093023.1-201ENST00000547375 507 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 MIR5006-201ENST00000583027 110 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 AL031274.2-201ENST00000599419 203 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.18□□□□□ -2.06
CLCN3P51790 MIR6845-201ENST00000613182 61 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 AL357075.2-201ENST00000614906 189 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 AP006437.1-201ENST00000641440 3685 ntBASIC2.18□□□□□ -2.06
CLCN3P51790 ZNF204P-201ENST00000416749 2397 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLCN3P51790 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLCN3P51790 RNU1-62P-201ENST00000362599 164 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 SNORD12B-201ENST00000410433 91 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 AC123900.1-201ENST00000420390 96 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCN3P51790 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
CLCN3P51790 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 RNU6-1143P-201ENST00000516125 104 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 RNU6-397P-201ENST00000516226 104 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 AC110588.1-201ENST00000559699 137 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 MIR5695-201ENST00000579717 85 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 MIR4659A-201ENST00000580269 81 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 MIR4300-201ENST00000581016 96 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 AC005296.1-201ENST00000616145 209 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 AC130454.1-201ENST00000622948 401 ntBASIC2.17□□□□□ -2.06
CLCN3P51790 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLCN3P51790 Y_RNA.19-201ENST00000362462 99 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 Y_RNA.64-201ENST00000362845 102 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 RNU6-743P-201ENST00000364151 106 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 RNU6-438P-201ENST00000365561 103 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.16□□□□□ -2.06
CLCN3P51790 Y_RNA.396-201ENST00000383949 103 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 SNORD63-201ENST00000384262 68 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 RNU6-1026P-201ENST00000384465 108 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 Y_RNA.556-201ENST00000384677 113 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 MIR583-201ENST00000384846 75 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 MIR549A-201ENST00000385268 96 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 MT-TW-201ENST00000387382 68 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 MT-TG-201ENST00000387429 68 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 HMGN2P39-201ENST00000398005 273 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 MIR1262-201ENST00000408276 93 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 RNA5SP504-201ENST00000410676 117 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 AC003989.2-201ENST00000440224 169 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 RNU6-408P-201ENST00000515910 100 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 RNU6-991P-201ENST00000516168 107 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 Y_RNA.713-201ENST00000517013 96 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.16□□□□□ -2.06
CLCN3P51790 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
CLCN3P51790 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CLCN3P51790 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLCN3P51790 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.06
CLCN3P51790 snoU2_19.2-201ENST00000363024 80 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 RNU6-238P-201ENST00000363313 106 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 RNA5SP99-201ENST00000364020 114 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 RNU6-879P-201ENST00000364328 108 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 Y_RNA.439-201ENST00000384119 94 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 Y_RNA.462-201ENST00000384268 102 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 SNORA67.2-201ENST00000384300 149 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 RNU6-505P-201ENST00000384427 107 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AC019129.1-201ENST00000403786 261 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 RPL21P38-201ENST00000418090 167 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCN3P51790 CYCSP49-201ENST00000420810 319 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AL445305.1-201ENST00000432577 575 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
CLCN3P51790 RPL23AP7-203ENST00000449021 469 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AC091179.3-201ENST00000474761 144 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.15□□□□□ -2.07
CLCN3P51790 RNU6-237P-201ENST00000515985 71 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 MZT1P2-201ENST00000604387 248 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AC010999.1-201ENST00000611856 324 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms