Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
CLK3P49761 RNU5F-2P-201ENST00000516066 82 ntBASIC2.71□□□□□ -1.98
CLK3P49761 AC136628.3-201ENST00000521868 290 ntBASIC2.71□□□□□ -1.98
CLK3P49761 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.71□□□□□ -1.98
CLK3P49761 MIR548X2-201ENST00000579776 100 ntBASIC2.71□□□□□ -1.98
CLK3P49761 MIR4431-201ENST00000579990 94 ntBASIC2.71□□□□□ -1.98
CLK3P49761 AL137843.1-201ENST00000605078 385 ntBASIC2.71□□□□□ -1.98
CLK3P49761 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.71□□□□□ -1.98
CLK3P49761 MAPK10-266ENST00000641066 6555 ntBASIC2.71□□□□□ -1.98
CLK3P49761 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CLK3P49761 RNU6-801P-201ENST00000364087 105 ntBASIC2.7□□□□□ -1.98
CLK3P49761 RNU6-454P-201ENST00000364292 107 ntBASIC2.7□□□□□ -1.98
CLK3P49761 RNU6-818P-201ENST00000364837 108 ntBASIC2.7□□□□□ -1.98
CLK3P49761 RNU6-1328P-201ENST00000410938 106 ntBASIC2.7□□□□□ -1.98
CLK3P49761 U8.19-201ENST00000459095 133 ntBASIC2.7□□□□□ -1.98
CLK3P49761 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CLK3P49761 AC103810.1-201ENST00000579873 453 ntBASIC2.7□□□□□ -1.98
CLK3P49761 MIR4744-201ENST00000581563 82 ntBASIC2.7□□□□□ -1.98
CLK3P49761 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLK3P49761 AC090115.4-201ENST00000609970 188 ntBASIC2.7□□□□□ -1.98
CLK3P49761 AC013791.1-201ENST00000616619 62 ntBASIC2.7□□□□□ -1.98
CLK3P49761 MIR7157-201ENST00000635801 60 ntBASIC2.7□□□□□ -1.98
CLK3P49761 AC100821.1-201ENST00000523153 2479 ntBASIC2.7□□□□□ -1.98
CLK3P49761 AC096644.4-201ENST00000563417 2912 ntBASIC2.7□□□□□ -1.98
CLK3P49761 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CLK3P49761 AC010332.2-201ENST00000613083 1904 ntBASIC2.7□□□□□ -1.98
CLK3P49761 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CLK3P49761 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.69□□□□□ -1.98
CLK3P49761 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.69□□□□□ -1.98
CLK3P49761 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLK3P49761 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
CLK3P49761 Y_RNA.415-201ENST00000384012 112 ntBASIC2.69□□□□□ -1.98
CLK3P49761 SNORA54-201ENST00000384281 123 ntBASIC2.69□□□□□ -1.98
CLK3P49761 SNORA40-201ENST00000388090 126 ntBASIC2.69□□□□□ -1.98
CLK3P49761 RNU6-578P-201ENST00000390980 103 ntBASIC2.69□□□□□ -1.98
CLK3P49761 SNORA48.5-201ENST00000391143 135 ntBASIC2.69□□□□□ -1.98
CLK3P49761 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.69□□□□□ -1.98
CLK3P49761 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
CLK3P49761 RNU6-344P-201ENST00000516635 111 ntBASIC2.69□□□□□ -1.98
CLK3P49761 SNORA31.15-201ENST00000516771 132 ntBASIC2.69□□□□□ -1.98
CLK3P49761 AC021269.2-201ENST00000532318 330 ntBASIC2.69□□□□□ -1.98
CLK3P49761 AL034555.1-201ENST00000604816 211 ntBASIC2.69□□□□□ -1.98
CLK3P49761 PCGEM1.1-201ENST00000613431 131 ntBASIC2.69□□□□□ -1.98
CLK3P49761 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
CLK3P49761 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
CLK3P49761 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
CLK3P49761 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.68□□□□□ -1.98
CLK3P49761 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLK3P49761 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CLK3P49761 RNA5SP205-201ENST00000364653 136 ntBASIC2.68□□□□□ -1.98
CLK3P49761 RNU1-57P-201ENST00000384491 166 ntBASIC2.68□□□□□ -1.98
CLK3P49761 RNU6-376P-201ENST00000384731 106 ntBASIC2.68□□□□□ -1.98
CLK3P49761 RNA5SP201-201ENST00000410316 124 ntBASIC2.68□□□□□ -1.98
CLK3P49761 RNU6-710P-201ENST00000410424 105 ntBASIC2.68□□□□□ -1.98
CLK3P49761 RPL23AP83-201ENST00000434984 473 ntBASIC2.68□□□□□ -1.98
CLK3P49761 AC107027.2-201ENST00000512197 115 ntBASIC2.68□□□□□ -1.98
CLK3P49761 RNU6-107P-201ENST00000516643 102 ntBASIC2.68□□□□□ -1.98
CLK3P49761 SCARNA3-201ENST00000517097 143 ntBASIC2.68□□□□□ -1.98
CLK3P49761 AC027176.1-201ENST00000560204 514 ntBASIC2.68□□□□□ -1.98
CLK3P49761 MIR4446-201ENST00000578505 67 ntBASIC2.68□□□□□ -1.98
CLK3P49761 MIR3199-1-201ENST00000582434 88 ntBASIC2.68□□□□□ -1.98
CLK3P49761 MIR3670-2-201ENST00000582974 65 ntBASIC2.68□□□□□ -1.98
CLK3P49761 MIR3670-1-201ENST00000584160 65 ntBASIC2.68□□□□□ -1.98
CLK3P49761 MIR3670-3-201ENST00000584855 65 ntBASIC2.68□□□□□ -1.98
CLK3P49761 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
CLK3P49761 SNORD11B-201ENST00000607707 90 ntBASIC2.68□□□□□ -1.98
CLK3P49761 AC093732.2-201ENST00000607950 274 ntBASIC2.68□□□□□ -1.98
CLK3P49761 AC069294.1-201ENST00000608397 350 ntBASIC2.68□□□□□ -1.98
CLK3P49761 MIR3670-4-201ENST00000612260 65 ntBASIC2.68□□□□□ -1.98
CLK3P49761 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLK3P49761 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLK3P49761 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.67□□□□□ -1.98
CLK3P49761 RNU6-529P-201ENST00000363383 104 ntBASIC2.67□□□□□ -1.98
CLK3P49761 SNORD115-30-201ENST00000364117 82 ntBASIC2.67□□□□□ -1.98
CLK3P49761 Y_RNA.287-201ENST00000364853 94 ntBASIC2.67□□□□□ -1.98
CLK3P49761 SNORA8.3-201ENST00000384679 139 ntBASIC2.67□□□□□ -1.98
CLK3P49761 MIR626-201ENST00000385032 94 ntBASIC2.67□□□□□ -1.98
CLK3P49761 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLK3P49761 SNORA26.5-201ENST00000391215 123 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AL031003.1-201ENST00000404229 172 ntBASIC2.67□□□□□ -1.98
CLK3P49761 EEF1A1P41-201ENST00000414667 207 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.67□□□□□ -1.98
CLK3P49761 RPL30P13-201ENST00000418873 348 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AL135790.2-201ENST00000437701 267 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AC074290.1-201ENST00000448883 135 ntBASIC2.67□□□□□ -1.98
CLK3P49761 snoU13.14-201ENST00000459372 104 ntBASIC2.67□□□□□ -1.98
CLK3P49761 RPL23AP70-201ENST00000483361 460 ntBASIC2.67□□□□□ -1.98
CLK3P49761 RNA5SP272-201ENST00000516095 111 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.67□□□□□ -1.98
CLK3P49761 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.67□□□□□ -1.98
CLK3P49761 EIF4A1P12-201ENST00000551910 141 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.67□□□□□ -1.98
CLK3P49761 AC090616.3-201ENST00000582184 217 ntBASIC2.67□□□□□ -1.98
CLK3P49761 DNAJC19P2-201ENST00000593340 302 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AL161756.2-201ENST00000604597 246 ntBASIC2.67□□□□□ -1.98
CLK3P49761 TCL6_2.1-201ENST00000615162 119 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AC005562.2-201ENST00000618264 111 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
CLK3P49761 AC068205.3-201ENST00000636385 468 ntBASIC2.67□□□□□ -1.98
CLK3P49761 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms