Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR5696-201ENST00000578474 85 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 MIR4422-201ENST00000581938 83 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 RN7SL793P-201ENST00000583259 296 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 SNORD11B-201ENST00000607707 90 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 snoZ196.1-201ENST00000625269 89 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 MIR3662-201ENST00000637030 95 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 ICE2P2-201ENST00000483823 2787 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CXCL12P48061 MIR302D-201ENST00000362275 68 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 RNU6-727P-201ENST00000363592 107 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 SNORD1A-201ENST00000364968 72 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 RNU6-245P-201ENST00000384020 107 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 RNU1-78P-201ENST00000391248 165 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 MIR1253-201ENST00000408273 105 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 MIR548F1-201ENST00000408667 84 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.02□□□□□ -2.25
CXCL12P48061 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.02□□□□□ -2.25
CXCL12P48061 snoU13.27-201ENST00000459278 104 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 RPS26P55-201ENST00000471178 356 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 AC092989.1-201ENST00000481235 277 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 RPS29P25-201ENST00000481709 171 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 MTND4P12-201ENST00000498999 1377 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 AK6P2-201ENST00000549020 471 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.02□□□□□ -2.25
CXCL12P48061 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.02□□□□□ -2.25
CXCL12P48061 AC009248.2-201ENST00000619826 254 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 MIR3688-2-201ENST00000636963 87 ntBASIC1.02□□□□□ -2.25
CXCL12P48061 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
CXCL12P48061 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CXCL12P48061 Y_RNA.415-201ENST00000384012 112 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 Y_RNA.453-201ENST00000384223 109 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-17P-201ENST00000384245 107 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-1215P-201ENST00000384441 102 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-18P-201ENST00000384527 107 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNY1P4-201ENST00000384595 115 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-541P-201ENST00000384709 110 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 Y_RNA.573-201ENST00000384763 105 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 MIR216A-201ENST00000385063 110 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNA5SP109-201ENST00000391010 116 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-159P-201ENST00000391080 106 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 AL161935.2-201ENST00000414627 60 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 AC009161.1-201ENST00000417306 376 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 AC243428.1-201ENST00000421099 264 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 FTH1P12-201ENST00000432137 551 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 AC069257.2-201ENST00000441819 155 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-221P-201ENST00000459541 99 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 AC103851.1-201ENST00000506833 274 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-1146P-201ENST00000516282 102 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNU6-1198P-201ENST00000516904 67 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 RNA5SP454-201ENST00000517231 127 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 MIR4742-201ENST00000581069 85 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 MIR4273-201ENST00000582824 84 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 AP003465.2-201ENST00000602571 373 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 U4.5-201ENST00000617137 123 ntBASIC1.01□□□□□ -2.25
CXCL12P48061 Y_RNA.48-201ENST00000362710 103 ntBASIC1□□□□□ -2.25
CXCL12P48061 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
CXCL12P48061 RNU1-133P-201ENST00000364867 167 ntBASIC1□□□□□ -2.25
CXCL12P48061 Y_RNA.301-201ENST00000364990 103 ntBASIC1□□□□□ -2.25
CXCL12P48061 RNU6-1240P-201ENST00000365155 104 ntBASIC1□□□□□ -2.25
CXCL12P48061 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
CXCL12P48061 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
CXCL12P48061 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1□□□□□ -2.25
CXCL12P48061 USP9YP30-201ENST00000430729 455 ntBASIC1□□□□□ -2.25
CXCL12P48061 AC015922.2-201ENST00000435593 184 ntBASIC1□□□□□ -2.25
CXCL12P48061 AC091179.3-201ENST00000474761 144 ntBASIC1□□□□□ -2.25
CXCL12P48061 AL163195.1-201ENST00000496941 348 ntBASIC1□□□□□ -2.25
CXCL12P48061 RNU6-718P-201ENST00000516166 105 ntBASIC1□□□□□ -2.25
CXCL12P48061 RN7SKP49-201ENST00000516675 260 ntBASIC1□□□□□ -2.25
CXCL12P48061 RNU6-566P-201ENST00000516790 107 ntBASIC1□□□□□ -2.25
CXCL12P48061 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
CXCL12P48061 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1□□□□□ -2.25
CXCL12P48061 MIR3973-201ENST00000579824 107 ntBASIC1□□□□□ -2.25
CXCL12P48061 AC090517.2-201ENST00000614966 680 ntBASIC1□□□□□ -2.25
CXCL12P48061 MIR6128-201ENST00000615528 109 ntBASIC1□□□□□ -2.25
CXCL12P48061 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CXCL12P48061 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CXCL12P48061 Y_RNA.157-201ENST00000363638 102 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 SNORA72.2-201ENST00000365028 127 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 Y_RNA.405-201ENST00000383979 100 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 Y_RNA.451-201ENST00000384200 100 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 RNU6-842P-201ENST00000384269 107 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 Y_RNA.524-201ENST00000384564 100 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 Y_RNA.561-201ENST00000384694 100 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 MIR515-2-201ENST00000384883 83 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 MIR515-1-201ENST00000384884 83 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 MIR194-1-201ENST00000384892 85 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 RNA5SP323-201ENST00000391094 133 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CXCL12P48061 RNA5SP118-201ENST00000410385 109 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 COX6CP10-201ENST00000416832 224 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 RPS27P16-201ENST00000425758 201 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 AC005002.2-201ENST00000438228 269 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 AL606517.2-201ENST00000442855 241 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 MTND1P17-201ENST00000448961 204 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 RPS27P1-201ENST00000450552 247 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.99□□□□□ -2.25
CXCL12P48061 RNU6-1132P-201ENST00000459214 107 ntBASIC0.99□□□□□ -2.25
CXCL12P48061 AP000870.1-201ENST00000472927 406 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms