Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CHRNA4P43681 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHRNA4P43681 OTUD4P1-201ENST00000237841 3067 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.59□□□□□ -1.83
CHRNA4P43681 RNY3P2-201ENST00000362918 102 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 RNU4-36P-201ENST00000364294 144 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 Y_RNA.265-201ENST00000364677 108 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 RNA5SP189-201ENST00000364920 115 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 SNORA5A-201ENST00000384111 134 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 SNORA1.3-201ENST00000384676 136 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 MIR607-201ENST00000385241 96 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 MT-TI-201ENST00000387365 69 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 MIR759-201ENST00000390224 91 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 AL139095.1-201ENST00000404326 391 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 PRSS3P4-201ENST00000453323 162 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 HMGN2P9-201ENST00000476875 229 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 RPS26P48-201ENST00000491713 339 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 RNU6-240P-201ENST00000516098 97 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 DEFB131E-201ENST00000532329 154 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 AC022254.1-201ENST00000567857 235 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 MIR5588-201ENST00000581890 63 ntBASIC3.59□□□□□ -1.83
CHRNA4P43681 AL161912.2-201ENST00000565707 3007 ntBASIC3.59□□□□□ -1.84
CHRNA4P43681 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHRNA4P43681 CEP170P1-201ENST00000502249 4587 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA4P43681 SNORA71.3-201ENST00000362582 128 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 SNORA31-201ENST00000362607 130 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNU4-13P-201ENST00000364019 141 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNU6-776P-201ENST00000364403 104 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNU6-1022P-201ENST00000365049 104 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 Y_RNA.313-201ENST00000365095 103 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 MIR483-201ENST00000385070 76 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 HSPE1P26-201ENST00000405341 275 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNA5SP511-201ENST00000410487 115 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 AC006989.1-201ENST00000427212 131 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNA5SP57-201ENST00000459463 123 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNU7-171P-201ENST00000459581 62 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 AC010598.1-201ENST00000510378 103 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNA5SP20-201ENST00000515976 84 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 AL162726.3-218ENST00000636401 95 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 AC012442.3-202ENST00000636742 206 ntBASIC3.58□□□□□ -1.84
CHRNA4P43681 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA4P43681 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHRNA4P43681 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA4P43681 RNU6-529P-201ENST00000363383 104 ntBASIC3.57□□□□□ -1.84
CHRNA4P43681 SNORA73.2-201ENST00000364946 201 ntBASIC3.57□□□□□ -1.84
CHRNA4P43681 MIR548D2-201ENST00000384955 97 ntBASIC3.57□□□□□ -1.84
CHRNA4P43681 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA4P43681 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.57□□□□□ -1.84
CHRNA4P43681 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA4P43681 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA4P43681 SNORD65B-201ENST00000459126 73 ntBASIC3.57□□□□□ -1.84
CHRNA4P43681 RPS29P20-201ENST00000489592 171 ntBASIC3.57□□□□□ -1.84
CHRNA4P43681 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.57□□□□□ -1.84
CHRNA4P43681 CR392039.5-201ENST00000623201 510 ntBASIC3.57□□□□□ -1.84
CHRNA4P43681 AC000403.1-201ENST00000613696 3585 ntBASIC3.57□□□□□ -1.84
CHRNA4P43681 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHRNA4P43681 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA4P43681 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA4P43681 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
CHRNA4P43681 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA4P43681 SNORA63.1-201ENST00000362493 131 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 RNU6-1209P-201ENST00000363655 107 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 SNORA51.4-201ENST00000364993 124 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 RNU6-117P-201ENST00000365415 107 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 AL031121.1-201ENST00000406553 254 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 YME1L1P1-201ENST00000429435 297 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 AL133547.1-201ENST00000448546 220 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 RPS3P1-201ENST00000456781 192 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 RN7SKP18-201ENST00000516005 275 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 AC107934.2-201ENST00000518653 310 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.56□□□□□ -1.84
CHRNA4P43681 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRNA4P43681 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.56□□□□□ -1.84
CHRNA4P43681 RPL17P51-201ENST00000605218 238 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 U6.98-201ENST00000637157 84 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 AC007496.3-201ENST00000624987 3443 ntBASIC3.56□□□□□ -1.84
CHRNA4P43681 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA4P43681 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.56□□□□□ -1.84
CHRNA4P43681 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHRNA4P43681 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
CHRNA4P43681 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHRNA4P43681 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.55□□□□□ -1.84
CHRNA4P43681 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHRNA4P43681 RNU6-1010P-201ENST00000362757 107 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 Y_RNA.437-201ENST00000384113 113 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 RNA5SP354-201ENST00000391247 136 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 AL451046.2-201ENST00000403074 277 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 AC096949.1-201ENST00000412047 152 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.55□□□□□ -1.84
CHRNA4P43681 AC063976.3-201ENST00000426849 329 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 RPL39P25-201ENST00000449384 154 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 AC097462.1-201ENST00000514125 324 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 RNU7-61P-201ENST00000515897 61 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 RNU6-1073P-201ENST00000517182 106 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 AC026333.2-201ENST00000542164 106 ntBASIC3.55□□□□□ -1.84
CHRNA4P43681 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms