Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CBX3P8-201ENST00000532412 525 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 AL442163.3-201ENST00000554110 156 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.03□□□□□ -2.24
TNFSF9P41273 MZT1P2-201ENST00000604387 248 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 7SK.8-201ENST00000612110 250 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 TCL6_2.1-201ENST00000615162 119 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 7SK.11-201ENST00000615477 250 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 7SK.13-201ENST00000622040 250 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 AC099654.5-201ENST00000636479 350 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TNFSF9P41273 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
TNFSF9P41273 MIR373-201ENST00000362273 69 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RNU6-623P-201ENST00000363143 105 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RNU6-727P-201ENST00000363592 107 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RNU6-1235P-201ENST00000384559 107 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RNU6-417P-201ENST00000384712 107 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 MIR32-201ENST00000384965 70 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 MIR181A1-201ENST00000385026 110 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 MIR1253-201ENST00000408273 105 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RPL37P10-201ENST00000412884 288 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.02□□□□□ -2.25
TNFSF9P41273 RPS27P1-201ENST00000450552 247 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RNU6-498P-201ENST00000459468 107 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 U8.21-201ENST00000459536 136 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RPL31P58-201ENST00000469001 379 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 HMGN1P12-201ENST00000499125 195 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RNU6-864P-201ENST00000516256 108 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 RNU1-117P-201ENST00000517041 158 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 AC016256.1-201ENST00000547971 354 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 AC026470.2-201ENST00000561492 181 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 MIR4742-201ENST00000581069 85 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 AC007014.2-201ENST00000615581 479 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 AL359697.1-201ENST00000624879 587 ntBASIC1.02□□□□□ -2.25
TNFSF9P41273 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
TNFSF9P41273 RNU6-1305P-201ENST00000364353 104 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 Y_RNA.287-201ENST00000364853 94 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 Y_RNA.354-201ENST00000365448 111 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 RNU6-975P-201ENST00000384296 105 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
TNFSF9P41273 RNA5SP323-201ENST00000391094 133 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 RNA5SP467-201ENST00000391274 118 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.01□□□□□ -2.25
TNFSF9P41273 AC005002.2-201ENST00000438228 269 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 PCMTD1P1-201ENST00000455560 355 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 RNU6-120P-201ENST00000516077 103 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 RNU6-1146P-201ENST00000516282 102 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 MTND1P5-201ENST00000517906 940 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 AC027288.2-201ENST00000553028 243 ntBASIC1.01□□□□□ -2.25
TNFSF9P41273 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.01□□□□□ -2.25
TNFSF9P41273 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
TNFSF9P41273 RNU6-874P-201ENST00000362390 105 ntBASIC1□□□□□ -2.25
TNFSF9P41273 RNU6-222P-201ENST00000362438 107 ntBASIC1□□□□□ -2.25
TNFSF9P41273 Y_RNA.86-201ENST00000363020 111 ntBASIC1□□□□□ -2.25
TNFSF9P41273 Y_RNA.453-201ENST00000384223 109 ntBASIC1□□□□□ -2.25
TNFSF9P41273 Y_RNA.530-201ENST00000384587 101 ntBASIC1□□□□□ -2.25
TNFSF9P41273 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1□□□□□ -2.25
TNFSF9P41273 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
TNFSF9P41273 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1□□□□□ -2.25
TNFSF9P41273 MTND1P4-201ENST00000435196 415 ntBASIC1□□□□□ -2.25
TNFSF9P41273 MTATP6P13-201ENST00000438531 667 ntBASIC1□□□□□ -2.25
TNFSF9P41273 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
TNFSF9P41273 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1□□□□□ -2.25
TNFSF9P41273 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1□□□□□ -2.25
TNFSF9P41273 AC007215.1-201ENST00000464893 276 ntBASIC1□□□□□ -2.25
TNFSF9P41273 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
TNFSF9P41273 SUMO2P16-201ENST00000519475 264 ntBASIC1□□□□□ -2.25
TNFSF9P41273 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
TNFSF9P41273 FRG2DP-202ENST00000566967 323 ntBASIC1□□□□□ -2.25
TNFSF9P41273 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
TNFSF9P41273 AC019193.3-201ENST00000609144 554 ntBASIC1□□□□□ -2.25
TNFSF9P41273 AC009248.2-201ENST00000619826 254 ntBASIC1□□□□□ -2.25
TNFSF9P41273 U6.108-201ENST00000637764 58 ntBASIC1□□□□□ -2.25
TNFSF9P41273 AC073869.6-201ENST00000640656 341 ntBASIC1□□□□□ -2.25
TNFSF9P41273 MTND4P12-201ENST00000498999 1377 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 Y_RNA.9-201ENST00000362354 101 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 RNU6-873P-201ENST00000363833 107 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 Y_RNA.415-201ENST00000384012 112 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
TNFSF9P41273 SNORA12.1-201ENST00000390873 148 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 RNA5SP109-201ENST00000391010 116 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 AL356776.1-201ENST00000406574 447 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 RNU6-57P-201ENST00000411348 103 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 RNU6-1304P-201ENST00000411374 106 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 AL353572.1-201ENST00000442490 417 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 AC074290.1-201ENST00000448883 135 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 HSPE1P13-201ENST00000451143 297 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 U8.22-201ENST00000459141 133 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 Y_RNA.682-201ENST00000516457 100 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 RNU6-566P-201ENST00000516790 107 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 RNU6-58P-201ENST00000517143 103 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 RNA5SP454-201ENST00000517231 127 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFSF9P41273 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFSF9P41273 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.99□□□□□ -2.25
TNFSF9P41273 POLR3GP2-201ENST00000588366 668 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 AC137590.2-201ENST00000619709 240 ntBASIC0.99□□□□□ -2.25
TNFSF9P41273 AC006504.8-201ENST00000621046 635 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms