Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC092447.3-201ENST00000426027 686 ntBASIC0.81□□□□□ -2.28
BRCA1P38398 AC245047.3-201ENST00000429428 127 ntBASIC0.81□□□□□ -2.28
BRCA1P38398 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.81□□□□□ -2.28
BRCA1P38398 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.81□□□□□ -2.28
BRCA1P38398 RNU6-1038P-201ENST00000516516 104 ntBASIC0.81□□□□□ -2.28
BRCA1P38398 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.81□□□□□ -2.28
BRCA1P38398 MTND3P12-201ENST00000559068 328 ntBASIC0.81□□□□□ -2.28
BRCA1P38398 AC008088.1-201ENST00000580993 280 ntBASIC0.81□□□□□ -2.28
BRCA1P38398 AL357312.1-201ENST00000603879 298 ntBASIC0.81□□□□□ -2.28
BRCA1P38398 AC005562.2-201ENST00000618264 111 ntBASIC0.81□□□□□ -2.28
BRCA1P38398 RNA5SP259-201ENST00000365541 109 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 RNU6-439P-201ENST00000384188 106 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 RNU6-348P-201ENST00000384386 107 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AL356776.1-201ENST00000406574 447 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.8□□□□□ -2.28
BRCA1P38398 PCMTD1P1-201ENST00000455560 355 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AC048334.1-201ENST00000477975 159 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 RNU11-2P-201ENST00000516898 142 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.8□□□□□ -2.28
BRCA1P38398 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AL078596.1-201ENST00000624856 447 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AC068137.3-201ENST00000639191 341 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 RNU6-254P-201ENST00000363377 107 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 RNU6-1065P-201ENST00000384513 106 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.8□□□□□ -2.28
BRCA1P38398 RPL39P39-201ENST00000455840 151 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 CCDC34P1-201ENST00000507441 517 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 RNU7-99P-201ENST00000516271 62 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 RNU7-40P-201ENST00000516397 64 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 SNORA70.22-201ENST00000517160 124 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AC025647.1-201ENST00000517879 253 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AP003484.1-201ENST00000530974 250 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AC090049.2-201ENST00000550377 109 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 Z94722.1-201ENST00000604328 474 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 SNORD11B-201ENST00000607707 90 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 AC067863.3-201ENST00000624172 122 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.8□□□□□ -2.28
BRCA1P38398 MIR3974-201ENST00000637126 96 ntBASIC0.8□□□□□ -2.28
BRCA1P38398 Y_RNA.123-201ENST00000363338 102 ntBASIC0.79□□□□□ -2.28
BRCA1P38398 Y_RNA.179-201ENST00000363844 90 ntBASIC0.79□□□□□ -2.28
BRCA1P38398 RNU6-259P-201ENST00000383999 107 ntBASIC0.79□□□□□ -2.28
BRCA1P38398 MTCO2P16-201ENST00000436962 677 ntBASIC0.79□□□□□ -2.28
BRCA1P38398 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.79□□□□□ -2.28
BRCA1P38398 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
BRCA1P38398 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.79□□□□□ -2.28
BRCA1P38398 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.79□□□□□ -2.28
BRCA1P38398 MIR3672-201ENST00000584290 82 ntBASIC0.79□□□□□ -2.28
BRCA1P38398 U6.73-201ENST00000619194 103 ntBASIC0.79□□□□□ -2.28
BRCA1P38398 AC006435.5-201ENST00000624486 112 ntBASIC0.79□□□□□ -2.28
BRCA1P38398 FER-210ENST00000628534 558 ntTSL 5 BASIC0.79□□□□□ -2.28
BRCA1P38398 VTRNA1-3-201ENST00000365645 89 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 RNU6-128P-201ENST00000383976 107 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 SNORD116-9-201ENST00000384000 95 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 RNU6-38P-201ENST00000384085 107 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 SNORD116-3-201ENST00000384287 95 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 SNORD116-7-201ENST00000384404 95 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 RNU6-505P-201ENST00000384427 107 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 SNORD116-5-201ENST00000384462 95 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 MIR517A-201ENST00000385001 87 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 RNU6-1068P-201ENST00000410958 103 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 AC083904.1-201ENST00000487828 231 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 AC074133.1-201ENST00000515696 183 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 SCARNA16.2-201ENST00000516520 172 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 POLR3GP2-201ENST00000588366 668 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 AC022217.4-201ENST00000604389 163 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 AC007684.1-201ENST00000609671 477 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.78□□□□□ -2.28
BRCA1P38398 SCARNA4-201ENST00000629045 128 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 U6.108-201ENST00000637764 58 ntBASIC0.78□□□□□ -2.28
BRCA1P38398 AC073544.1-201ENST00000600110 1595 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 RNU6-790P-201ENST00000384479 105 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 USMG5P1-201ENST00000425964 177 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 MTND4P18-201ENST00000447010 465 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 LINC01399-202ENST00000458450 244 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 RNU6-314P-201ENST00000516574 104 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 RNU6-430P-201ENST00000517078 107 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 DEFB131C-201ENST00000528817 165 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 AC025423.5-201ENST00000550230 219 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 AL118558.2-201ENST00000556294 238 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 AL513423.1-201ENST00000621695 132 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 AC006001.4-201ENST00000622243 395 ntBASIC0.78□□□□□ -2.29
BRCA1P38398 SNORA4.2-201ENST00000365313 147 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 MIR32-201ENST00000384965 70 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 AL353193.1-201ENST00000421444 268 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 MTCO3P18-201ENST00000440206 761 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.77□□□□□ -2.29
BRCA1P38398 MTCO2P7-201ENST00000446518 666 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 RNU7-34P-201ENST00000459394 64 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 HAR1A.1-201ENST00000459583 118 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 TRBVA-201ENST00000498804 316 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.77□□□□□ -2.29
BRCA1P38398 MIR4742-201ENST00000581069 85 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 AC100830.2-201ENST00000581636 240 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 AC073114.1-201ENST00000612027 490 ntBASIC0.77□□□□□ -2.29
BRCA1P38398 AP000568.1-201ENST00000282964 442 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 Y_RNA.167-201ENST00000363735 109 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 SNORA69-201ENST00000383895 132 ntBASIC0.76□□□□□ -2.29
BRCA1P38398 SNORA75-201ENST00000384158 137 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms