Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.19□□□□□ -2.06
KRT9P35527 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
KRT9P35527 AC067942.3-201ENST00000512025 362 ntBASIC2.19□□□□□ -2.06
KRT9P35527 RNU6-344P-201ENST00000516635 111 ntBASIC2.19□□□□□ -2.06
KRT9P35527 RNU4-77P-201ENST00000516692 156 ntBASIC2.19□□□□□ -2.06
KRT9P35527 SUMO2P18-201ENST00000518873 252 ntBASIC2.19□□□□□ -2.06
KRT9P35527 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
KRT9P35527 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.19□□□□□ -2.06
KRT9P35527 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.19□□□□□ -2.06
KRT9P35527 AC104581.2-201ENST00000572227 430 ntBASIC2.19□□□□□ -2.06
KRT9P35527 AC100812.1-201ENST00000607622 580 ntBASIC2.19□□□□□ -2.06
KRT9P35527 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.19□□□□□ -2.06
KRT9P35527 AL138825.1-201ENST00000618587 192 ntBASIC2.19□□□□□ -2.06
KRT9P35527 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
KRT9P35527 MIR219B-201ENST00000637023 88 ntBASIC2.19□□□□□ -2.06
KRT9P35527 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.19□□□□□ -2.06
KRT9P35527 AC245060.5-201ENST00000610778 3293 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNY1P16-201ENST00000363063 111 ntBASIC2.18□□□□□ -2.06
KRT9P35527 Y_RNA.153-201ENST00000363615 91 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNU6-137P-201ENST00000363680 108 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNU6-1305P-201ENST00000364353 104 ntBASIC2.18□□□□□ -2.06
KRT9P35527 SNORD14.1-201ENST00000365609 90 ntBASIC2.18□□□□□ -2.06
KRT9P35527 Y_RNA.405-201ENST00000383979 100 ntBASIC2.18□□□□□ -2.06
KRT9P35527 Y_RNA.451-201ENST00000384200 100 ntBASIC2.18□□□□□ -2.06
KRT9P35527 Y_RNA.524-201ENST00000384564 100 ntBASIC2.18□□□□□ -2.06
KRT9P35527 Y_RNA.561-201ENST00000384694 100 ntBASIC2.18□□□□□ -2.06
KRT9P35527 MIR586-201ENST00000385035 97 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNU6-823P-201ENST00000391042 103 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNA5SP212-201ENST00000391223 107 ntBASIC2.18□□□□□ -2.06
KRT9P35527 AL353997.1-201ENST00000432936 108 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNA5SP57-201ENST00000459463 123 ntBASIC2.18□□□□□ -2.06
KRT9P35527 AC114982.1-201ENST00000469402 321 ntBASIC2.18□□□□□ -2.06
KRT9P35527 AC105758.1-201ENST00000506038 399 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNA5SP364-201ENST00000516938 78 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNU6-856P-201ENST00000516959 98 ntBASIC2.18□□□□□ -2.06
KRT9P35527 RNU7-4P-201ENST00000516961 62 ntBASIC2.18□□□□□ -2.06
KRT9P35527 AC022616.4-201ENST00000522985 181 ntBASIC2.18□□□□□ -2.06
KRT9P35527 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.18□□□□□ -2.06
KRT9P35527 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.18□□□□□ -2.06
KRT9P35527 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
KRT9P35527 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.18□□□□□ -2.06
KRT9P35527 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRT9P35527 RNU6-873P-201ENST00000363833 107 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU6-450P-201ENST00000364654 107 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU6-1318P-201ENST00000365389 103 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU6-975P-201ENST00000384296 105 ntBASIC2.17□□□□□ -2.06
KRT9P35527 Y_RNA.476-201ENST00000384347 108 ntBASIC2.17□□□□□ -2.06
KRT9P35527 MT-TG-201ENST00000387429 68 ntBASIC2.17□□□□□ -2.06
KRT9P35527 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
KRT9P35527 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU6-1109P-201ENST00000391187 107 ntBASIC2.17□□□□□ -2.06
KRT9P35527 MIR1289-2-201ENST00000408360 111 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RN7SKP223-201ENST00000410582 62 ntBASIC2.17□□□□□ -2.06
KRT9P35527 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.17□□□□□ -2.06
KRT9P35527 RPS29P21-201ENST00000496272 170 ntBASIC2.17□□□□□ -2.06
KRT9P35527 MRPS17P9-201ENST00000511924 393 ntBASIC2.17□□□□□ -2.06
KRT9P35527 SNORA25.14-201ENST00000516481 132 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU2-34P-201ENST00000516534 121 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU1-117P-201ENST00000517041 158 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU6-1271P-201ENST00000517049 105 ntBASIC2.17□□□□□ -2.06
KRT9P35527 RNU6-794P-201ENST00000517261 64 ntBASIC2.17□□□□□ -2.06
KRT9P35527 UBL5P4-201ENST00000562584 236 ntBASIC2.17□□□□□ -2.06
KRT9P35527 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
KRT9P35527 AL355297.3-201ENST00000604082 446 ntBASIC2.17□□□□□ -2.06
KRT9P35527 AC008873.1-201ENST00000625051 138 ntBASIC2.17□□□□□ -2.06
KRT9P35527 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRT9P35527 RNA5SP99-201ENST00000364020 114 ntBASIC2.16□□□□□ -2.06
KRT9P35527 SNORA67.2-201ENST00000384300 149 ntBASIC2.16□□□□□ -2.06
KRT9P35527 MIR625-201ENST00000385047 85 ntBASIC2.16□□□□□ -2.06
KRT9P35527 RNU6-159P-201ENST00000391080 106 ntBASIC2.16□□□□□ -2.06
KRT9P35527 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.16□□□□□ -2.06
KRT9P35527 AC016717.1-201ENST00000448918 286 ntBASIC2.16□□□□□ -2.06
KRT9P35527 ATP5J2P3-201ENST00000451550 258 ntBASIC2.16□□□□□ -2.06
KRT9P35527 AC112492.4-201ENST00000456549 352 ntBASIC2.16□□□□□ -2.06
KRT9P35527 AP000870.1-201ENST00000472927 406 ntBASIC2.16□□□□□ -2.06
KRT9P35527 AC144568.1-201ENST00000520139 137 ntBASIC2.16□□□□□ -2.06
KRT9P35527 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.16□□□□□ -2.06
KRT9P35527 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
KRT9P35527 SNORD58B-201ENST00000607313 66 ntBASIC2.16□□□□□ -2.06
KRT9P35527 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRT9P35527 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRT9P35527 CENPCP1-201ENST00000533085 2578 ntBASIC2.16□□□□□ -2.06
KRT9P35527 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
KRT9P35527 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRT9P35527 RNU6-1235P-201ENST00000384559 107 ntBASIC2.15□□□□□ -2.07
KRT9P35527 SUMO2P12-201ENST00000405924 140 ntBASIC2.15□□□□□ -2.07
KRT9P35527 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.15□□□□□ -2.07
KRT9P35527 MIR1252-201ENST00000408861 65 ntBASIC2.15□□□□□ -2.07
KRT9P35527 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
KRT9P35527 HMGN2P19-201ENST00000425149 265 ntBASIC2.15□□□□□ -2.07
KRT9P35527 AC074290.1-201ENST00000448883 135 ntBASIC2.15□□□□□ -2.07
KRT9P35527 RNU7-169P-201ENST00000459456 61 ntBASIC2.15□□□□□ -2.07
KRT9P35527 RNU6-498P-201ENST00000459468 107 ntBASIC2.15□□□□□ -2.07
KRT9P35527 RNU6-948P-201ENST00000516374 107 ntBASIC2.15□□□□□ -2.07
KRT9P35527 SNORA40.14-201ENST00000516543 86 ntBASIC2.15□□□□□ -2.07
KRT9P35527 Y_RNA.706-201ENST00000516933 99 ntBASIC2.15□□□□□ -2.07
KRT9P35527 AC131281.1-201ENST00000522984 164 ntBASIC2.15□□□□□ -2.07
KRT9P35527 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.15□□□□□ -2.07
KRT9P35527 AC022254.1-201ENST00000567857 235 ntBASIC2.15□□□□□ -2.07
KRT9P35527 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms