Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MIR3133-201ENST00000583157 78 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC090115.4-201ENST00000609970 188 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC12P31275 Y_RNA.802-201ENST00000614892 130 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC022149.2-201ENST00000621061 203 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
HOXC12P31275 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC12P31275 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC12P31275 AL159152.1-201ENST00000635019 2587 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC017071.1-201ENST00000564407 2204 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC12P31275 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC12P31275 AL356292.1-201ENST00000283110 373 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 Y_RNA.24-201ENST00000362508 103 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 Y_RNA.182-201ENST00000363880 111 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 SNORD116-13-201ENST00000384408 92 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 MIR626-201ENST00000385032 94 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 RNU2-48P-201ENST00000410694 191 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 AC003685.2-201ENST00000422795 395 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC12P31275 AC010409.1-201ENST00000487382 476 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 AC091826.1-201ENST00000514065 313 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 SNORA4.4-201ENST00000515921 135 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC12P31275 MIR5004-201ENST00000579078 107 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 MIR3616-201ENST00000584070 92 ntBASIC2.98□□□□□ -1.93
HOXC12P31275 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXC12P31275 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
HOXC12P31275 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC12P31275 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HOXC12P31275 RNA5SP125-201ENST00000364843 120 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 RNU6-804P-201ENST00000384286 107 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 Y_RNA.572-201ENST00000384757 98 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 MIR181A2-201ENST00000384863 110 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 MTCO1P44-201ENST00000441935 243 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 RPS27P22-201ENST00000478056 241 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 RN7SL429P-201ENST00000479090 223 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 RN7SL489P-201ENST00000486185 223 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 RN7SL327P-201ENST00000488659 223 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.97□□□□□ -1.93
HOXC12P31275 AC004832.4-201ENST00000608952 331 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXC12P31275 RN7SL853P-201ENST00000617250 223 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.97□□□□□ -1.93
HOXC12P31275 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC12P31275 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC12P31275 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC12P31275 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC12P31275 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HOXC12P31275 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HOXC12P31275 Y_RNA.121-201ENST00000363309 113 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 SNORA80A-201ENST00000363922 136 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 Y_RNA.332-201ENST00000365271 113 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 Y_RNA.506-201ENST00000384494 102 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 RNU6-381P-201ENST00000391259 108 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 AC016909.1-201ENST00000415916 166 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 AL357134.1-201ENST00000445848 426 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC12P31275 Y_RNA.797-201ENST00000515977 94 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 RNU6-63P-201ENST00000516690 95 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 RNU6-667P-201ENST00000517186 102 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 IGKV2-26-201ENST00000518305 343 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 MIR3144-201ENST00000579460 79 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC12P31275 AC006386.2-201ENST00000624491 75 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 AC012005.1-201ENST00000624575 75 ntBASIC2.96□□□□□ -1.94
HOXC12P31275 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC12P31275 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC12P31275 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC12P31275 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC12P31275 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC12P31275 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC12P31275 RNU6-144P-201ENST00000383951 107 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 RNU6-394P-201ENST00000410735 107 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 RNU6-1135P-201ENST00000411083 103 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC12P31275 AL445687.1-201ENST00000439946 251 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 AC025750.2-201ENST00000442609 450 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC12P31275 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC12P31275 RNU7-115P-201ENST00000516433 55 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 AC005972.2-201ENST00000604690 348 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC12P31275 AL162274.2-201ENST00000614406 332 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC12P31275 MIR548AY-201ENST00000617669 107 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 AC006435.5-201ENST00000624486 112 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.95□□□□□ -1.94
HOXC12P31275 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC12P31275 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXC12P31275 Y_RNA.170-201ENST00000363746 110 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 snoU2_19.4-201ENST00000364329 80 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 RNU6-312P-201ENST00000364629 107 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 RNU6-969P-201ENST00000383900 105 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 Y_RNA.412-201ENST00000384001 104 ntBASIC2.94□□□□□ -1.94
HOXC12P31275 RNU6-187P-201ENST00000384139 106 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms