Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RNU6-612P-201ENST00000516909 102 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 RNU6-430P-201ENST00000517078 107 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.05□□□□□ -2.4
HOXA6P31267 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.05□□□□□ -2.4
HOXA6P31267 RPL23AP91-201ENST00000569211 455 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 AC027807.2-201ENST00000616099 408 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 uc_338.34-201ENST00000617467 174 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 AC087588.2-201ENST00000617667 426 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 ZNF204P-201ENST00000416749 2397 ntBASIC0.05□□□□□ -2.4
HOXA6P31267 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
HOXA6P31267 Y_RNA.100-201ENST00000363141 102 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 RNU5E-5P-201ENST00000365379 116 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 RNU6-1286P-201ENST00000383871 107 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 Y_RNA.399-201ENST00000383955 105 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 RNU6-1029P-201ENST00000384109 107 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 RNU6-74P-201ENST00000384235 107 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 AL355143.1-201ENST00000407101 841 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.04□□□□□ -2.4
HOXA6P31267 AL606489.2-201ENST00000433886 234 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 GPR143P-201ENST00000434155 205 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 AL512286.1-201ENST00000439244 400 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.04□□□□□ -2.4
HOXA6P31267 SNRPGP12-201ENST00000449481 213 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 GMFBP1-201ENST00000467831 427 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 AC093534.1-201ENST00000504977 132 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.04□□□□□ -2.4
HOXA6P31267 RN7SKP164-201ENST00000516138 266 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 MIR4305-201ENST00000583252 102 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 MIR548AB-201ENST00000584917 84 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 RNU6-85P-201ENST00000605989 107 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 SNORA25.18-201ENST00000607153 114 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 RNU4-5P-201ENST00000607255 135 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 MTND4P9-201ENST00000507819 1346 ntBASIC0.04□□□□□ -2.4
HOXA6P31267 MIRLET7C-201ENST00000362160 84 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 RNU6-1266P-201ENST00000362794 105 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 RNU6-727P-201ENST00000363592 107 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 RNU6-815P-201ENST00000384080 113 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 MIR562-201ENST00000384894 95 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 RNA5SP219-201ENST00000390940 113 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 SNORD111-201ENST00000408139 94 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 MIR1185-2-201ENST00000408687 86 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 RNU6-994P-201ENST00000410507 111 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 SNORD83.1-201ENST00000411362 77 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 SSR1P2-201ENST00000415208 787 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.03□□□□□ -2.4
HOXA6P31267 AL353997.1-201ENST00000432936 108 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.03□□□□□ -2.4
HOXA6P31267 RNU6-1037P-201ENST00000459571 107 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 RPS29P27-201ENST00000463711 170 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 AP000870.1-201ENST00000472927 406 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.03□□□□□ -2.4
HOXA6P31267 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.03□□□□□ -2.4
HOXA6P31267 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
HOXA6P31267 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.03□□□□□ -2.4
HOXA6P31267 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.03□□□□□ -2.4
HOXA6P31267 MIR4300-201ENST00000581016 96 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 SCARNA4-201ENST00000629045 128 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 MTND4P4-201ENST00000439033 1366 ntBASIC0.03□□□□□ -2.4
HOXA6P31267 RNU6-369P-201ENST00000362515 102 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 SNORA1B-201ENST00000362535 133 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 RNU6-1097P-201ENST00000363586 107 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 RNU6-906P-201ENST00000384700 70 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 MIR516B2-201ENST00000385190 85 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 RNA5SP482-201ENST00000391269 118 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 MIR1827-201ENST00000408549 66 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 PIGPP3-201ENST00000425307 415 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.02□□□□□ -2.41
HOXA6P31267 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.02□□□□□ -2.41
HOXA6P31267 NDUFB4P10-201ENST00000452541 359 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.02□□□□□ -2.41
HOXA6P31267 SCARNA18-201ENST00000459004 134 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AC091021.1-201ENST00000468051 388 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.02□□□□□ -2.41
HOXA6P31267 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.02□□□□□ -2.41
HOXA6P31267 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.02□□□□□ -2.41
HOXA6P31267 RNU6-1291P-201ENST00000516591 104 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 RNU2-56P-201ENST00000516826 190 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 RNU2-46P-201ENST00000517038 113 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 RNU6-1096P-201ENST00000517089 102 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 RNU6-58P-201ENST00000517143 103 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 MTND2P32-201ENST00000521584 1038 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AF235103.2-201ENST00000525753 346 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AC027288.2-201ENST00000553028 243 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 MIR4703-201ENST00000577728 79 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 MIR4438-201ENST00000585271 93 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AC012433.1-201ENST00000588916 398 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AL162730.1-201ENST00000605734 292 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 SNORD11B-201ENST00000607707 90 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AC018645.2-201ENST00000609151 472 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 MIR6079-201ENST00000635807 62 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 AC007671.2-201ENST00000637344 619 ntBASIC0.02□□□□□ -2.41
HOXA6P31267 Y_RNA.123-201ENST00000363338 102 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 Y_RNA.267-201ENST00000364679 109 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 Y_RNA.336-201ENST00000365307 109 ntBASIC0.01□□□□□ -2.41
HOXA6P31267 RNU6-108P-201ENST00000365558 107 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms