Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 Y_RNA.597-201ENST00000410463 100 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU2-63P-201ENST00000410792 194 ntBASIC1.83□□□□□ -2.12
SHC1P29353 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.83□□□□□ -2.12
SHC1P29353 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
SHC1P29353 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
SHC1P29353 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.83□□□□□ -2.12
SHC1P29353 AC004386.2-201ENST00000441858 148 ntBASIC1.83□□□□□ -2.12
SHC1P29353 AC007395.1-201ENST00000451333 677 ntBASIC1.83□□□□□ -2.12
SHC1P29353 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.83□□□□□ -2.12
SHC1P29353 SNORD127-201ENST00000458892 86 ntBASIC1.83□□□□□ -2.12
SHC1P29353 MTND1P19-201ENST00000511780 315 ntBASIC1.83□□□□□ -2.12
SHC1P29353 SNORA40.9-201ENST00000515895 93 ntBASIC1.83□□□□□ -2.12
SHC1P29353 MIR449C-201ENST00000516047 92 ntBASIC1.83□□□□□ -2.12
SHC1P29353 Y_RNA.680-201ENST00000516441 93 ntBASIC1.83□□□□□ -2.12
SHC1P29353 RNU2-44P-201ENST00000516795 194 ntBASIC1.83□□□□□ -2.12
SHC1P29353 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.83□□□□□ -2.12
SHC1P29353 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.83□□□□□ -2.12
SHC1P29353 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
SHC1P29353 AC062037.2-201ENST00000610137 73 ntBASIC1.83□□□□□ -2.12
SHC1P29353 TCL6_2.1-201ENST00000615162 119 ntBASIC1.83□□□□□ -2.12
SHC1P29353 AC012640.5-201ENST00000623897 319 ntBASIC1.83□□□□□ -2.12
SHC1P29353 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SHC1P29353 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHC1P29353 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
SHC1P29353 Y_RNA.16-201ENST00000362421 102 ntBASIC1.82□□□□□ -2.12
SHC1P29353 Y_RNA.286-201ENST00000364813 102 ntBASIC1.82□□□□□ -2.12
SHC1P29353 Y_RNA.307-201ENST00000365022 117 ntBASIC1.82□□□□□ -2.12
SHC1P29353 RNU6-793P-201ENST00000384233 104 ntBASIC1.82□□□□□ -2.12
SHC1P29353 SNORD63-201ENST00000384262 68 ntBASIC1.82□□□□□ -2.12
SHC1P29353 RNU1-148P-201ENST00000384472 162 ntBASIC1.82□□□□□ -2.12
SHC1P29353 RNU6-1274P-201ENST00000384557 107 ntBASIC1.82□□□□□ -2.12
SHC1P29353 SNORD23.1-201ENST00000408212 104 ntBASIC1.82□□□□□ -2.12
SHC1P29353 RNU6-1203P-201ENST00000410703 110 ntBASIC1.82□□□□□ -2.12
SHC1P29353 AL121890.1-201ENST00000435457 205 ntBASIC1.82□□□□□ -2.12
SHC1P29353 YWHAEP4-201ENST00000505390 198 ntBASIC1.82□□□□□ -2.12
SHC1P29353 RNU6-966P-201ENST00000516479 104 ntBASIC1.82□□□□□ -2.12
SHC1P29353 Y_RNA.683-201ENST00000516508 93 ntBASIC1.82□□□□□ -2.12
SHC1P29353 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
SHC1P29353 AK6P2-201ENST00000549020 471 ntBASIC1.82□□□□□ -2.12
SHC1P29353 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.82□□□□□ -2.12
SHC1P29353 SNRPGP20-201ENST00000604477 205 ntBASIC1.82□□□□□ -2.12
SHC1P29353 AP001282.2-201ENST00000616149 309 ntBASIC1.82□□□□□ -2.12
SHC1P29353 MIR376A1-201ENST00000616574 68 ntBASIC1.82□□□□□ -2.12
SHC1P29353 AC090517.3-201ENST00000625170 141 ntBASIC1.82□□□□□ -2.12
SHC1P29353 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.82□□□□□ -2.12
SHC1P29353 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
SHC1P29353 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SHC1P29353 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHC1P29353 SNORD113-8-201ENST00000363497 74 ntBASIC1.81□□□□□ -2.12
SHC1P29353 SNORD87-201ENST00000364849 89 ntBASIC1.81□□□□□ -2.12
SHC1P29353 Y_RNA.288-201ENST00000364854 92 ntBASIC1.81□□□□□ -2.12
SHC1P29353 SNORA67.2-201ENST00000384300 149 ntBASIC1.81□□□□□ -2.12
SHC1P29353 Y_RNA.541-201ENST00000384640 113 ntBASIC1.81□□□□□ -2.12
SHC1P29353 MT-TG-201ENST00000387429 68 ntBASIC1.81□□□□□ -2.12
SHC1P29353 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHC1P29353 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHC1P29353 AL033519.2-201ENST00000403958 392 ntBASIC1.81□□□□□ -2.12
SHC1P29353 AL355497.1-201ENST00000406262 551 ntBASIC1.81□□□□□ -2.12
SHC1P29353 RNU4-30P-201ENST00000410245 143 ntBASIC1.81□□□□□ -2.12
SHC1P29353 Y_RNA.602-201ENST00000410535 92 ntBASIC1.81□□□□□ -2.12
SHC1P29353 RNA5SP504-201ENST00000410676 117 ntBASIC1.81□□□□□ -2.12
SHC1P29353 RNU2-38P-201ENST00000410856 79 ntBASIC1.81□□□□□ -2.12
SHC1P29353 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.81□□□□□ -2.12
SHC1P29353 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.81□□□□□ -2.12
SHC1P29353 RNU6-1132P-201ENST00000459214 107 ntBASIC1.81□□□□□ -2.12
SHC1P29353 TRBVB-201ENST00000477100 408 ntBASIC1.81□□□□□ -2.12
SHC1P29353 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.81□□□□□ -2.12
SHC1P29353 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.81□□□□□ -2.12
SHC1P29353 RNU7-193P-201ENST00000516723 65 ntBASIC1.81□□□□□ -2.12
SHC1P29353 Y_RNA.713-201ENST00000517013 96 ntBASIC1.81□□□□□ -2.12
SHC1P29353 RNU6-1271P-201ENST00000517049 105 ntBASIC1.81□□□□□ -2.12
SHC1P29353 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.81□□□□□ -2.12
SHC1P29353 AP002001.1-203ENST00000534002 267 ntBASIC1.81□□□□□ -2.12
SHC1P29353 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
SHC1P29353 AC233702.2-202ENST00000562547 291 ntBASIC1.81□□□□□ -2.12
SHC1P29353 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.81□□□□□ -2.12
SHC1P29353 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
SHC1P29353 MIR4423-201ENST00000580922 80 ntBASIC1.81□□□□□ -2.12
SHC1P29353 MIR5006-201ENST00000583027 110 ntBASIC1.81□□□□□ -2.12
SHC1P29353 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.81□□□□□ -2.12
SHC1P29353 AC005562.2-201ENST00000618264 111 ntBASIC1.81□□□□□ -2.12
SHC1P29353 MIR5739-201ENST00000619803 80 ntBASIC1.81□□□□□ -2.12
SHC1P29353 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.81□□□□□ -2.12
SHC1P29353 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.81□□□□□ -2.12
SHC1P29353 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
SHC1P29353 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SHC1P29353 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHC1P29353 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHC1P29353 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SHC1P29353 RNU1-62P-201ENST00000362599 164 ntBASIC1.8□□□□□ -2.12
SHC1P29353 RNU6-379P-201ENST00000363813 104 ntBASIC1.8□□□□□ -2.12
SHC1P29353 Y_RNA.188-201ENST00000363952 111 ntBASIC1.8□□□□□ -2.12
SHC1P29353 RNA5SP240-201ENST00000365355 128 ntBASIC1.8□□□□□ -2.12
SHC1P29353 Y_RNA.415-201ENST00000384012 112 ntBASIC1.8□□□□□ -2.12
SHC1P29353 Y_RNA.447-201ENST00000384184 113 ntBASIC1.8□□□□□ -2.12
SHC1P29353 Y_RNA.581-201ENST00000391017 97 ntBASIC1.8□□□□□ -2.12
SHC1P29353 U3.40-201ENST00000408706 208 ntBASIC1.8□□□□□ -2.12
SHC1P29353 RNA5SP270-201ENST00000411361 118 ntBASIC1.8□□□□□ -2.12
SHC1P29353 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SHC1P29353 HSPE1P25-201ENST00000455484 251 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms