Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL391903.3-201ENST00000612158 163 ntBASIC3.76□□□□□ -1.81
RXRBP28702 Y_RNA.802-201ENST00000614892 130 ntBASIC3.76□□□□□ -1.81
RXRBP28702 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RXRBP28702 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RXRBP28702 Y_RNA.355-201ENST00000365462 98 ntBASIC3.75□□□□□ -1.81
RXRBP28702 RNU6-643P-201ENST00000384018 107 ntBASIC3.75□□□□□ -1.81
RXRBP28702 RNU6-768P-201ENST00000384683 107 ntBASIC3.75□□□□□ -1.81
RXRBP28702 MIR526A2-201ENST00000390198 65 ntBASIC3.75□□□□□ -1.81
RXRBP28702 CYCSP48-201ENST00000417124 323 ntBASIC3.75□□□□□ -1.81
RXRBP28702 AC245517.4-201ENST00000448601 281 ntBASIC3.75□□□□□ -1.81
RXRBP28702 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.75□□□□□ -1.81
RXRBP28702 AIG1P1-201ENST00000503376 148 ntBASIC3.75□□□□□ -1.81
RXRBP28702 AC006199.1-201ENST00000548728 219 ntBASIC3.75□□□□□ -1.81
RXRBP28702 SNRPGP20-201ENST00000604477 205 ntBASIC3.75□□□□□ -1.81
RXRBP28702 AC011603.4-201ENST00000611325 277 ntBASIC3.75□□□□□ -1.81
RXRBP28702 MIR6129-201ENST00000616087 109 ntBASIC3.75□□□□□ -1.81
RXRBP28702 MIR6076-201ENST00000617521 113 ntBASIC3.75□□□□□ -1.81
RXRBP28702 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.75□□□□□ -1.81
RXRBP28702 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RXRBP28702 AC007256.1-201ENST00000392253 2765 ntBASIC3.74□□□□□ -1.81
RXRBP28702 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
RXRBP28702 RNA5SP295-201ENST00000362655 121 ntBASIC3.74□□□□□ -1.81
RXRBP28702 RNA5SP201-201ENST00000410316 124 ntBASIC3.74□□□□□ -1.81
RXRBP28702 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.74□□□□□ -1.81
RXRBP28702 HMGN2P23-201ENST00000456759 269 ntBASIC3.74□□□□□ -1.81
RXRBP28702 AC010401.1-201ENST00000463867 348 ntBASIC3.74□□□□□ -1.81
RXRBP28702 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.74□□□□□ -1.81
RXRBP28702 CYCTP-201ENST00000504253 315 ntBASIC3.74□□□□□ -1.81
RXRBP28702 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.74□□□□□ -1.81
RXRBP28702 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.74□□□□□ -1.81
RXRBP28702 AC115990.1-201ENST00000526957 301 ntBASIC3.74□□□□□ -1.81
RXRBP28702 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.74□□□□□ -1.81
RXRBP28702 MIR3136-201ENST00000583498 78 ntBASIC3.74□□□□□ -1.81
RXRBP28702 AC099778.2-201ENST00000610904 211 ntBASIC3.74□□□□□ -1.81
RXRBP28702 U6.98-201ENST00000637157 84 ntBASIC3.74□□□□□ -1.81
RXRBP28702 MIR7153-201ENST00000637758 57 ntBASIC3.74□□□□□ -1.81
RXRBP28702 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RXRBP28702 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RXRBP28702 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RXRBP28702 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RXRBP28702 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.73□□□□□ -1.81
RXRBP28702 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RXRBP28702 AL591034.1-201ENST00000407447 340 ntBASIC3.73□□□□□ -1.81
RXRBP28702 RNU6-1064P-201ENST00000410626 104 ntBASIC3.73□□□□□ -1.81
RXRBP28702 AC099548.1-201ENST00000421443 426 ntBASIC3.73□□□□□ -1.81
RXRBP28702 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.73□□□□□ -1.81
RXRBP28702 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.73□□□□□ -1.81
RXRBP28702 RNU7-141P-201ENST00000459304 62 ntBASIC3.73□□□□□ -1.81
RXRBP28702 RN7SL330P-201ENST00000469709 307 ntBASIC3.73□□□□□ -1.81
RXRBP28702 RN7SL20P-201ENST00000488827 297 ntBASIC3.73□□□□□ -1.81
RXRBP28702 RNU6-928P-201ENST00000516876 104 ntBASIC3.73□□□□□ -1.81
RXRBP28702 MIR3646-201ENST00000578301 84 ntBASIC3.73□□□□□ -1.81
RXRBP28702 MIR3609-201ENST00000582661 80 ntBASIC3.73□□□□□ -1.81
RXRBP28702 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.73□□□□□ -1.81
RXRBP28702 MIR4679-1-201ENST00000637619 75 ntBASIC3.73□□□□□ -1.81
RXRBP28702 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.73□□□□□ -1.81
RXRBP28702 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.73□□□□□ -1.81
RXRBP28702 AC002543.1-201ENST00000299783 1954 ntBASIC3.72□□□□□ -1.81
RXRBP28702 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.72□□□□□ -1.81
RXRBP28702 RNU1-75P-201ENST00000347264 129 ntBASIC3.72□□□□□ -1.81
RXRBP28702 Y_RNA.229-201ENST00000364347 113 ntBASIC3.72□□□□□ -1.81
RXRBP28702 RNU6-755P-201ENST00000364400 103 ntBASIC3.72□□□□□ -1.81
RXRBP28702 MIR15B-201ENST00000385045 98 ntBASIC3.72□□□□□ -1.81
RXRBP28702 EI24P2-201ENST00000397776 1076 ntBASIC3.72□□□□□ -1.81
RXRBP28702 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.72□□□□□ -1.81
RXRBP28702 AP000567.1-201ENST00000406413 156 ntBASIC3.72□□□□□ -1.81
RXRBP28702 AL121914.1-201ENST00000450188 156 ntBASIC3.72□□□□□ -1.81
RXRBP28702 UQCRHP3-201ENST00000451503 251 ntBASIC3.72□□□□□ -1.81
RXRBP28702 RPL36AP21-201ENST00000490372 323 ntBASIC3.72□□□□□ -1.81
RXRBP28702 RAC1P5-201ENST00000512182 576 ntBASIC3.72□□□□□ -1.81
RXRBP28702 RNU6-344P-201ENST00000516635 111 ntBASIC3.72□□□□□ -1.81
RXRBP28702 RNU6-107P-201ENST00000516643 102 ntBASIC3.72□□□□□ -1.81
RXRBP28702 Y_RNA.712-201ENST00000517011 92 ntBASIC3.72□□□□□ -1.81
RXRBP28702 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.72□□□□□ -1.81
RXRBP28702 AC023043.3-201ENST00000593113 385 ntBASIC3.72□□□□□ -1.81
RXRBP28702 PCGEM1.1-201ENST00000613431 131 ntBASIC3.72□□□□□ -1.81
RXRBP28702 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RXRBP28702 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.71□□□□□ -1.82
RXRBP28702 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.71□□□□□ -1.82
RXRBP28702 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RXRBP28702 SNORD114-1-201ENST00000362705 72 ntBASIC3.71□□□□□ -1.82
RXRBP28702 AP002088.1-201ENST00000382740 395 ntBASIC3.71□□□□□ -1.82
RXRBP28702 RNU6-1144P-201ENST00000384247 104 ntBASIC3.71□□□□□ -1.82
RXRBP28702 SNORA67.2-201ENST00000384300 149 ntBASIC3.71□□□□□ -1.82
RXRBP28702 RNU6-476P-201ENST00000384726 107 ntBASIC3.71□□□□□ -1.82
RXRBP28702 SNORD37.2-201ENST00000391075 66 ntBASIC3.71□□□□□ -1.82
RXRBP28702 RNU6-588P-201ENST00000410281 105 ntBASIC3.71□□□□□ -1.82
RXRBP28702 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.71□□□□□ -1.82
RXRBP28702 HMGN2P20-201ENST00000437531 273 ntBASIC3.71□□□□□ -1.82
RXRBP28702 Y_RNA.709-201ENST00000516952 92 ntBASIC3.71□□□□□ -1.82
RXRBP28702 MIR3923-201ENST00000579521 83 ntBASIC3.71□□□□□ -1.82
RXRBP28702 MIR3613-201ENST00000579844 87 ntBASIC3.71□□□□□ -1.82
RXRBP28702 AL670379.2-201ENST00000604983 252 ntBASIC3.71□□□□□ -1.82
RXRBP28702 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
RXRBP28702 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.71□□□□□ -1.82
RXRBP28702 AC068205.3-201ENST00000636385 468 ntBASIC3.71□□□□□ -1.82
RXRBP28702 AC108206.1-201ENST00000570186 4159 ntBASIC3.71□□□□□ -1.82
RXRBP28702 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RXRBP28702 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.7□□□□□ -1.82
RXRBP28702 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms