Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
HLA-DMAP28067 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
HLA-DMAP28067 RNU6-1123P-201ENST00000362347 106 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 RNU6-137P-201ENST00000363680 108 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 Y_RNA.405-201ENST00000383979 100 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 Y_RNA.451-201ENST00000384200 100 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 Y_RNA.473-201ENST00000384333 102 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 RNU6-831P-201ENST00000384548 107 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 Y_RNA.524-201ENST00000384564 100 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 Y_RNA.530-201ENST00000384587 101 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 Y_RNA.561-201ENST00000384694 100 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 RNU6-541P-201ENST00000384709 110 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 MIR19B1-201ENST00000384829 87 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 MIR515-2-201ENST00000384883 83 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 MIR515-1-201ENST00000384884 83 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 MIR10B-201ENST00000385011 110 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 MIR153-2-201ENST00000385225 87 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 MIR320B2-201ENST00000408479 138 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 AC243428.1-201ENST00000421099 264 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 AC074290.1-201ENST00000448883 135 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 AC093534.1-201ENST00000504977 132 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 RNA5SP458-201ENST00000516188 119 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 SCARNA16.2-201ENST00000516520 172 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.78□□□□□ -2.28
HLA-DMAP28067 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DMAP28067 AC023157.2-201ENST00000540596 141 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 AC124303.1-201ENST00000605703 360 ntBASIC0.78□□□□□ -2.28
HLA-DMAP28067 RNU6-222P-201ENST00000362438 107 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 U3.8-201ENST00000363675 217 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 RNU6-842P-201ENST00000384269 107 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 MRPL42P3-201ENST00000401492 326 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 FGF7P8-201ENST00000402994 292 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 AC008134.1-201ENST00000420943 193 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.77□□□□□ -2.29
HLA-DMAP28067 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMAP28067 AC245047.3-201ENST00000429428 127 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 AL589823.1-201ENST00000429577 183 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 DAP3P1-201ENST00000441522 278 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 MTND4P18-201ENST00000447010 465 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 ACA59.1-201ENST00000515966 143 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMAP28067 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMAP28067 AC024909.2-201ENST00000553035 286 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 MIR4778-201ENST00000577635 80 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMAP28067 AC048344.4-201ENST00000619744 527 ntBASIC0.77□□□□□ -2.29
HLA-DMAP28067 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.77□□□□□ -2.29
HLA-DMAP28067 Y_RNA.179-201ENST00000363844 90 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 RNU6-281P-201ENST00000384212 103 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 RNU6-793P-201ENST00000384233 104 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 MIR222-201ENST00000384992 110 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 RN7SKP200-201ENST00000410564 320 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 AP1B1P2-201ENST00000416196 106 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 USP9YP30-201ENST00000430729 455 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DMAP28067 AC010469.2-201ENST00000496412 480 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DMAP28067 RNU7-99P-201ENST00000516271 62 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 RNU6-922P-201ENST00000516753 99 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DMAP28067 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.76□□□□□ -2.29
HLA-DMAP28067 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DMAP28067 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 AP000942.3-201ENST00000603702 160 ntBASIC0.76□□□□□ -2.29
HLA-DMAP28067 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
HLA-DMAP28067 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 Y_RNA.436-201ENST00000384097 102 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 RNU6-505P-201ENST00000384427 107 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 AL355796.1-201ENST00000406706 323 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 MTND3P23-201ENST00000431980 347 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 RPS4XP11-201ENST00000446897 772 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 NDUFB4P10-201ENST00000452541 359 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 AC093850.1-201ENST00000454121 251 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 AC048334.1-201ENST00000477975 159 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 RNU6-1198P-201ENST00000516904 67 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 SNORA70.22-201ENST00000517160 124 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 AL137100.2-201ENST00000555786 315 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 AC004584.2-201ENST00000570407 410 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 MIR4273-201ENST00000582824 84 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 AL359757.2-201ENST00000624309 274 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 AC100810.6-201ENST00000638068 285 ntBASIC0.75□□□□□ -2.29
HLA-DMAP28067 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 RNU6-595P-201ENST00000363944 107 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 RNU4-24P-201ENST00000364565 139 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 Y_RNA.363-201ENST00000365529 113 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 CALM2P4-201ENST00000430810 426 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.74□□□□□ -2.29
HLA-DMAP28067 RPL39P38-201ENST00000467018 153 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 RNU7-175P-201ENST00000515915 61 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 RNU6-864P-201ENST00000516256 108 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 RNU6-107P-201ENST00000516643 102 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 RN7SKP49-201ENST00000516675 260 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 RNU6-1314P-201ENST00000517139 104 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.74□□□□□ -2.29
HLA-DMAP28067 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.74□□□□□ -2.29
HLA-DMAP28067 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms